ggKbase home page

SCNpilot_cont_500_bf_scaffold_234_2

Organism: SCNPILOT_CONT_500_BF_Chloroflexi_54_19

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 813..1544

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GB80_CHLAD similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 159
  • Evalue 5.20e-36
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 159
  • Evalue 1.60e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACL26680.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 159
  • Evalue 7.30e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chloroflexus aggregans → Chloroflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 732
ATGACATTTAGTGCGCATTTATACTCTTCACCGGCCGCCCTACCCCCCACAAAGCGAGGCAAATCTTTATCGGCCGGCTCGGGGGCCGGGGCTAAGCTAGGGACTCGCCCGCTACTACTGAAGGACCAGAGCTTAACCGACAAAAGACCGGTCGAGCAACTCTGCCTTTCAGTTGACCTTGATGACGACGCCGGGTATATCAGCCGGGTATTAGCAGGTGAGTTAGCGGCTTTTGAGTTTCTGGTTGAACGCTATAAGTCTCCAGTCTATAACTTTTGCTGCCGGATGCTAGATGACCGGACGGAAGGAGAAGACGCTTCCCAGGAGGTTTTCTTACGAGCCTTCACCCAACTTGCCTCCTACCGGCCCGGCTACTCCTCATTTATAACCTGGTTGTTGTCAATTGCGGCCCACCACTGTATTGACCTGTTACGGCGGCAGCGCTCACACCTGGATCTGGAACTGGTTAGCCTGTGGAAGTCGAGTGCGGAACCTCCGCCTGAAGAATTACTTTTAAGCCAGGAAAAAAGGGCAGAAGTCCAGGCTTTGCTGAATAAAGTGCCGTACGCTTACCGGAGTGTACTAATCCTGCGCTACTGGAATGATTTGAGCTATGCGGAGATAGCGTCGGCCGCCGGTCTTAGTTTGAGCGCGGTCAAGACCAGACTATTTCGAGGGCGTCATTTTCTGGCCCAGGAGCTGGCACTGCACCTAAACCACCAAACCGGGTAG
PROTEIN sequence
Length: 244
MTFSAHLYSSPAALPPTKRGKSLSAGSGAGAKLGTRPLLLKDQSLTDKRPVEQLCLSVDLDDDAGYISRVLAGELAAFEFLVERYKSPVYNFCCRMLDDRTEGEDASQEVFLRAFTQLASYRPGYSSFITWLLSIAAHHCIDLLRRQRSHLDLELVSLWKSSAEPPPEELLLSQEKRAEVQALLNKVPYAYRSVLILRYWNDLSYAEIASAAGLSLSAVKTRLFRGRHFLAQELALHLNHQTG*