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SCNpilot_cont_500_bf_scaffold_1168_12

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 10188..10607

Top 3 Functional Annotations

Value Algorithm Source
Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) {ECO:0000313|EMBL:CDX32800.1}; EC=4.1.1.39 {ECO:0000313|EMBL:CDX32800.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 139.0
  • Bit_score: 272
  • Evalue 3.40e-70
ribulose-bisphosphate carboxylase form I small subunit; K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 139.0
  • Bit_score: 227
  • Evalue 2.20e-57
ribulose bisphosphate carboxylase small chain n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003167587 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 139.0
  • Bit_score: 275
  • Evalue 3.70e-71

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCGCATCACCCAAGGAGCCTTTTCCTTCCTGCCCGATCTGACCGAAGACCAGATCAGGGCGCAGGTGCAGTACTGCATCGACAATCAATGGGCCGTCAGCCTGGAATTCACCGACGACCCGCATCCGCGGAATACCTATTGGGACATGTGGGGCCACCCGATGTTCGACAACCCCGATGCGGCGGCGCTGCTGTTCGAGCTCAAGGAATGCCGCAAGGTCTATGGCGACCGCTATATCCGCGTCGTCGCCTTCGACGCCTCGCATGGCTGGGAATCGGTGAAACTTTCCTTCATCGTCAACCGCCCGGCCGACGAGCCCGGCTACCAGCTGGAGCGGCAGGAAGCGCCAGGTCGCGTCGTGCGCTACACGACGAAGCCGTACGCGGCCGACCGTCCAGCCGGCGCGAGGTATGCGTAG
PROTEIN sequence
Length: 140
MRITQGAFSFLPDLTEDQIRAQVQYCIDNQWAVSLEFTDDPHPRNTYWDMWGHPMFDNPDAAALLFELKECRKVYGDRYIRVVAFDASHGWESVKLSFIVNRPADEPGYQLERQEAPGRVVRYTTKPYAADRPAGARYA*