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SCNpilot_cont_500_bf_scaffold_3741_5

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 2551..3243

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3AXW7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 219.0
  • Bit_score: 280
  • Evalue 1.10e-72
LysR family transcriptional regulator {ECO:0000313|EMBL:KJF70043.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 220.0
  • Bit_score: 334
  • Evalue 1.20e-88
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 217.0
  • Bit_score: 274
  • Evalue 2.50e-71

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCAATCGGCCGTGGAAGGGCTGGCGCGCGGCGATGGTCAGGAACTTTGCATCGCATCGGTGCCGAGCATCGCCAATGTGATGATGCCACGGGCCATTGCCGCGCTTCGCCGTCGCTATCCGGATCTCGCGCTCGACATCAATATCCTCAAGATCGAGGAGGCGATCGACTATCTCCTCCTGGGCCGTGGCGAACTGGTCGCTATTTCATCGCGTTTCGACCATGCCCTGATCAAGTTCGAACTTCTCGCCAGCGGCAGGCTTCTGTGCATTGTTCCGGAAAATGGTCCACTTGCCGCGCGCGGACGGATCACGCCGGCGGAAATGGCTGAGTTTCCGCTGATCGGTATCAATCCCAAGGATCCTTACGGTGCGGTCATGGCTGCCATGTTCGAGAATGCCGGACTGGAGTACCGCATGAACATAAAGGCCAGATTCGGGACGACGGTTTGCAGCCTTGTCGCGCAGGGGCTCGGAATTGCGATCATCGATGAATTCACCGTGGCTCACGGCCAGGTACCCGGGCTGAGGACACTCGATATCGACGCCGAAAGCACCTTTCATACCTATGTCGCCTATCGGAGCGACGTATCGCTCTCGGCATTCGCCGAACAGTTCCTTCGTCTGCTCAGGGCGGAAATGACGGCTGCCACTTCTCTGGGTGGCCAACGCTCACCGCCTCCAAAGCCGTAA
PROTEIN sequence
Length: 231
MQSAVEGLARGDGQELCIASVPSIANVMMPRAIAALRRRYPDLALDINILKIEEAIDYLLLGRGELVAISSRFDHALIKFELLASGRLLCIVPENGPLAARGRITPAEMAEFPLIGINPKDPYGAVMAAMFENAGLEYRMNIKARFGTTVCSLVAQGLGIAIIDEFTVAHGQVPGLRTLDIDAESTFHTYVAYRSDVSLSAFAEQFLRLLRAEMTAATSLGGQRSPPPKP*