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SCNpilot_cont_500_bf_scaffold_3741_6

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 3419..4228

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase protein {ECO:0000313|EMBL:AIC25271.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AIC25271.1};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 264.0
  • Bit_score: 319
  • Evalue 4.70e-84
shikimate dehydrogenase substrate binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 262.0
  • Bit_score: 250
  • Evalue 4.60e-64
Shikimate dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJM0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 267.0
  • Bit_score: 305
  • Evalue 3.80e-80
  • rbh

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGTTGTCGGTTCAGCTTTCGGGAGAGACGAAGCTTCTGCTTGTTGTCGGTGATCCGATCGAACAGGTCCTGTCGCCAACGGCGTTGACGGCTCTGCTCGCGCAACGCGGCAAGAACATCCTTGTCGTCCCGTTCCATGTACCAGCGTCCGAATTCCGGAAATCGATGGGTGCTTGCGAGGGCGTCCGAAACGTTCCAGGCGTGCTCGTTACCATCCCGCATAAACGCGCGGCACTCGGCCTTTGTGCCGACGTCACCGAGAGGGCACGGTTTGCCGGCTCCGTCAATGTCATGCGCAAGGAAGCACGCGGCTGGTTCGGCGACAACACCGACGGCTGCGGCTACATGGACGGCATCGCGCGGCTCGGCTTTACCGTCGAAGGCAAATCGGCCTTGCTCGTTGGCTGCGGCGGCGCCGGCTCGGCGATAGCGTTCGAAATCCTGCGGCGAGGCGCGGCCCGGCTGGCGCTGCACGATGTCGATGCCGGACGTCGTGACGCGCTCATCGAACGACTGTCGGCAGCTTTTCCCGGCCGCGTTTACGAAGGCAGTGAAGATCCCACCGGTTACGACTTCGTCGCCAACGCTACGCCAATGGGAATGGATCCCGCCGATCCCCTGCCGGTTATCGTCGAGAATCTGACGGCGAGCCAATTCGTCGCCTGCGCCGTAACCAAGCCTGCGGTCCCGCCGTTGATCGAAGCGGCACGGCAGCGCGGCTGCGCCACCATGACCGGCGCCGGGATGTTTCAGGCGCAAGCCGAAATCCTCATAGATTTTTTGCTCGCGCAGGGATCGGCGAATGCATAA
PROTEIN sequence
Length: 270
VLSVQLSGETKLLLVVGDPIEQVLSPTALTALLAQRGKNILVVPFHVPASEFRKSMGACEGVRNVPGVLVTIPHKRAALGLCADVTERARFAGSVNVMRKEARGWFGDNTDGCGYMDGIARLGFTVEGKSALLVGCGGAGSAIAFEILRRGAARLALHDVDAGRRDALIERLSAAFPGRVYEGSEDPTGYDFVANATPMGMDPADPLPVIVENLTASQFVACAVTKPAVPPLIEAARQRGCATMTGAGMFQAQAEILIDFLLAQGSANA*