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SCNpilot_cont_500_bf_scaffold_5476_2

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(309..1034)

Top 3 Functional Annotations

Value Algorithm Source
OmpA-like transmembrane region n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 243.0
  • Bit_score: 370
  • Evalue 1.50e-99
OmpA-like transmembrane region similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 243.0
  • Bit_score: 370
  • Evalue 4.60e-100
OmpA-like transmembrane region {ECO:0000313|EMBL:ABE62483.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 243.0
  • Bit_score: 370
  • Evalue 2.10e-99

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAAGACGTTTGTGTTCGCGACGGCCGCATCGTTCGCGTTGGTTGTATCGGCCGTCAGTGGGGTGGCGAACGCGGCGGACCTGCCGCCACGGCCTTATACGAAGGCACCGCCGCCGGTGACAGCGCCGGCGATTGTTTACAATTGGACCGGATTCTATATCGGCGGCCATCTCGGCGGCGCGTTCTCGGGTGACAACAGCCTGCAGGGCAGCGACGCCCGTTTCATGGGCGGCGTTCAGGGCGGTTACGATTATCAGTTCGCCAACAACTGGGTGCTGGGTCTCGAAGCGAATTACAGTTGGCTGGCTTCGACCGGCAGCGGTGTGGTGTTTCCGGGCGGTTCGGTGGCGTCGCTCAACAACCGCGGCCTCGGATCGGTCACCGGCCGGCTTGGTTTCACGACGGGGCCGCTGCTGCTTTATGCCAAGGGCGGTTACGCGTTCCGGGATAGCAATCTCGATGTGAGCGTTGCCGGCGTGTCGCAGCCGTTCAGCACTGACGGAAATCGCAAGGACGGCTACACCGTCGGTGCCGGCCTTGAATACATGTTCGCTCCGAACTGGTCGGCCAAGGTCGAGTACCAATACTATAATTTCGGCAACACCACGTTCACCGGCGGGCCGGCCGATGTCGTCGGAACGAGCTTCCGCAACGACGAACACACGGTCAAGGCCGGCTTGAACTATCGTTTCGGTTGGGGTGGACCGGCGGCGTCCAACTACTAG
PROTEIN sequence
Length: 242
MKTFVFATAASFALVVSAVSGVANAADLPPRPYTKAPPPVTAPAIVYNWTGFYIGGHLGGAFSGDNSLQGSDARFMGGVQGGYDYQFANNWVLGLEANYSWLASTGSGVVFPGGSVASLNNRGLGSVTGRLGFTTGPLLLYAKGGYAFRDSNLDVSVAGVSQPFSTDGNRKDGYTVGAGLEYMFAPNWSAKVEYQYYNFGNTTFTGGPADVVGTSFRNDEHTVKAGLNYRFGWGGPAASNY*