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SCNpilot_cont_500_bf_scaffold_6795_4

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(3306..3965)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI000316A579 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 215.0
  • Bit_score: 325
  • Evalue 3.80e-86
DNA-binding protein {ECO:0000313|EMBL:KIZ40895.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 215.0
  • Bit_score: 331
  • Evalue 1.30e-87
Hly-III-like protein; K11068 hemolysin III similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 215.0
  • Bit_score: 324
  • Evalue 2.00e-86

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGACGATCTTTCAGTTGAAGCAGTTTGCCTCGCACTCCGCCGCTGCCGCCGTTGGGGCCGTGCGCTGGAACTACGACCGCGCCGAGATCATCGCCGATGGCATCGTTCATGGCCTCGGTGTCGGCGTCGGTCTGGTGGCTGCGACCGCGCTGATCGTGCTCACCGGCGTATTTGCCTCGACGCCCGAGATCGTTTCGGTCTCGATCTACGCTGCCGGTCTGCTCACCATGCTGGGCTTCTCCGCGGCCTACAACATGTGGCCGGTGTCGCCGCGCAAATGGTGGCTGCGCCGGTTCGACCATTCGGCGATCTACGTCCTGATCGCCGCAACCTACACGCCGTTCATGATGCAGATGCACGATCGTGTGCTGGCGCTGCTGCTGCTGAGCGGGGTGTGGAGCGTCGCCGCAATCGGCATCGCGCTCAAGCTGTTCTTGCCGGGCCGCTTCGACCGGCTGTCGATCGTGCTGTATCTCGCGATGGGCTGGAGCGGACTTGCGGCCTATGATGCTGTCTTCACGTCGTTGCCGAAATTCACCCTGTGGTTCGTTGTCGCCGGCGGCGCGCTCTATACGCTCGGCGTGATCTTTCATACGTGGCGACGATTACGCTTCCAGAATGCAATCTGGCACGGCTTCGTCTTTGGATATTGCCGGTAA
PROTEIN sequence
Length: 220
MTIFQLKQFASHSAAAAVGAVRWNYDRAEIIADGIVHGLGVGVGLVAATALIVLTGVFASTPEIVSVSIYAAGLLTMLGFSAAYNMWPVSPRKWWLRRFDHSAIYVLIAATYTPFMMQMHDRVLALLLLSGVWSVAAIGIALKLFLPGRFDRLSIVLYLAMGWSGLAAYDAVFTSLPKFTLWFVVAGGALYTLGVIFHTWRRLRFQNAIWHGFVFGYCR*