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SCNpilot_cont_500_bf_scaffold_7269_2

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(112..957)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 273.0
  • Bit_score: 443
  • Evalue 3.80e-122
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 273.0
  • Bit_score: 443
  • Evalue 1.70e-121
Shikimate dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=AROE_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 273.0
  • Bit_score: 443
  • Evalue 1.20e-121

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGCCCGCGCCCGAGAGAGCTCCTGCCGCCTGCCTGATCGGCTGGCCGGCCGCGCATTCGCGCTCGCCGATCATCCATCACTACTGGCTGCATCGGTTTGGTATCGCAGGCGGCTACAGCATCGAGGCGGTGCCGCCGGAAGGTTTTGCCGAGTTCGTGCAGAACTTGTCGCATCACGGCTTCGTCGGCGCCAACGTCACTATTCCGCACAAGGAGCGGGCGCTGCTGTTGACAGAGCCGGACGAGCGCGCGCGCGCCGTCGGCGCCGCCAATACCCTATGGTACGAGGGTGAGACGCTGCGCTCCACCAATACCGACATCGAAGGCTTCATCAACAATCTCGATGCCAGCGCACCGAGATGGGATGCCGCTGACGAGGCTGTGGTGCTCGGCGCCGGTGGTTCGTCGCGCGCGGTGGTGTTCGGGTTGCTGGAGCGTGGCCTCAAGCGCGTGCATCTCGTCAATCGCACGGCGGGACGGGCGCAGGCATTGGCTGATCAGTTTGGCGAATGCGTTGTGCCCCACGGCTGGGACGCGCTCGGTGAGGTGCTGCCGCGTGTGCAATTGCTGGTCAATACCACGTCGCTCGGCATGAAGGGCCAGCCCGCATTGGCGATCGACGCGGGGCTCTTGCCAGCGCAGGCGACGGTGGCAGATTTGGTTTATGTGCCACTGGATACACCGCTGCTCGCAGCCGCGCATGAGCGAAAATTACGCACTGCCGACGGGCTCGGTATGCTGCTGCACCAGGCGGTGCGTGGATTCGAACTGTGGTTCGGGCGCAGGCCGGAAGTTACGCCCGAACTGCGCCAACTGGTCGAGGCCGATCTGGCGATCGTGCGGTAA
PROTEIN sequence
Length: 282
MPAPERAPAACLIGWPAAHSRSPIIHHYWLHRFGIAGGYSIEAVPPEGFAEFVQNLSHHGFVGANVTIPHKERALLLTEPDERARAVGAANTLWYEGETLRSTNTDIEGFINNLDASAPRWDAADEAVVLGAGGSSRAVVFGLLERGLKRVHLVNRTAGRAQALADQFGECVVPHGWDALGEVLPRVQLLVNTTSLGMKGQPALAIDAGLLPAQATVADLVYVPLDTPLLAAAHERKLRTADGLGMLLHQAVRGFELWFGRRPEVTPELRQLVEADLAIVR*