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SCNpilot_cont_500_bf_scaffold_7927_2

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 371..1279

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XC9_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 292.0
  • Bit_score: 350
  • Evalue 1.50e-93
RND transporter {ECO:0000313|EMBL:KIZ40464.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 304.0
  • Bit_score: 362
  • Evalue 7.10e-97
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 292.0
  • Bit_score: 350
  • Evalue 4.80e-94

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGACATGCATTGCCGCACTGTTGCCGTTCCGGCGGCGATTGGAACGTCCCGCCCGGGCGCTGCTGGCCGTTGCGGCGCTCTTCGCCGCGCCGCACGCTGCGCTGGCCGCCACCGAGGCGCCGAGCAACGCGGCGGCGGTGACAGTCTTCACCACCGCGAAGTCGTGTTTCTCGGACATCGTCGATGCGTTCGGCCTGCTGATCCCGCGCGAGGAGATCGCGGTGCGCCCGGACCGTCCCGGCCTGAAAGTGCAGGAGGTGTCGGTCGATCTCGGACAAACCGTCACCGCCGGGCAGCCGCTCGCCAAACTCGCCCAGCCCGAGGGCGGCAGCGTTACGGTTCAGGCGCCGGCCGCCGGCCTGCTCAGCGCATCGACCGCCGTGGTCGGGGCCGTCGCGTCCGGCAAGGGCGAAGCGCTGTTCAAGATCATCACCGGCAACGAGTTCGATCTTGCCGTGCGGGTGCCGACCCGCGACCTCGCCAAGTTGAAAGTCGATCAGCCCGCGACCATCCGGATCACCGGCATCGACGATCTTCAGGGCAAGGTGCGCCAGATCGGCGCCACCGTCGATCCCAACAGCCAGCTCGGCATGGCCTTCATCGGGATCACCACCCGGCGCGCGTTGCTGGTCAACGCCTCGGGACGGGCGTCGATCAAGACCGGCGAAAGCTGCGGCGTCTCGGTGCCGCTGACCGCGATCCTCTACAGCAGCGCCGGCACCGTGGTGCAGGTGGTGCGGCGCGACCGGGTCGAGACCCGGCGCGTCGAGATCGGCCTGATGGCGAGCGGGCGGGTGGAAATCCGCGAAGGCCTGTCGGAGGGAGAAACGGTGGTGACGCGCGCCGGAGCGCTGCTCCGCGAGGGCGATCCGGTGCGGCCGATCATGGCCGATACCGCGACGAAATAG
PROTEIN sequence
Length: 303
MTCIAALLPFRRRLERPARALLAVAALFAAPHAALAATEAPSNAAAVTVFTTAKSCFSDIVDAFGLLIPREEIAVRPDRPGLKVQEVSVDLGQTVTAGQPLAKLAQPEGGSVTVQAPAAGLLSASTAVVGAVASGKGEALFKIITGNEFDLAVRVPTRDLAKLKVDQPATIRITGIDDLQGKVRQIGATVDPNSQLGMAFIGITTRRALLVNASGRASIKTGESCGVSVPLTAILYSSAGTVVQVVRRDRVETRRVEIGLMASGRVEIREGLSEGETVVTRAGALLREGDPVRPIMADTATK*