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SCNpilot_cont_500_bf_scaffold_12975_3

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: comp(862..1800)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Pandoraea sp. B-6 RepID=UPI000372D64B similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 306.0
  • Bit_score: 591
  • Evalue 5.30e-166
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 312.0
  • Bit_score: 586
  • Evalue 1.80e-164
RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 313.0
  • Bit_score: 457
  • Evalue 3.70e-126
  • rbh

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
TTGAGTACTGCCGCCACTTTGCATCCGACGACGCCGGCCACCGGCACGGCGCCGACTTCGCGAGCCCTTGCGTTTGCCCCGTCTGCATTGATGCTGCCGGGCAGTCTGGGCAATATCGAAAGCTATATTCAAGCCGTCCATCGTATTCCGCTGCTTACCGCCGAGGAAGAGCAGTCGCTTGCCAAGCGTCTGCGCGAGAACGACGACCTCGAAGCCGCCCGTCAGCTCGTGCTCTCGCACCTGCGCCTGGTGGTGTCGATCGCGCGTAACTACCTCGGCTACGGTCTGCCGCACGCCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAAGCCGTCAAGCGCTTCGATCCGACCCAGGGGGTGCGACTCGTGTCGTACGCCATGCATTGGATCAAGGCCGAGATTCACGAGTATGTGCTGCGCAATTGGCGCACGGTCAAGGTTGCGACGACCAAGGCCCAGCGCAAGCTGTTCTGCAATCTGCGCAGCCAGAAGCAAGGCCTGCAGGCGTTCACGCCGGACGAGATCGATCAGGTCGCCCGCGATCTGAACGTCAAGCGCGAAGACGTCGTCGAGATGGAAACGCGCATGTCGGGCGGCGATATCGCCCTCGAAGGGCATAGCGACGACAGCGACAGCGCAAGCTTCGCCCCCATCGCGTATCTGGCCGACTCGCACCAGGAGCCGACCGCCGTGATCGCCGCACGCGAGCGCGACCGTCTGCAAAGCGATGGCCTGCAAACGGCCCTCGGCCGTCTCGACGCACGCAGCCGCCGCATCATCGAAGCGCGCTGGCTGTCGGTGGCCGACGACGGCAGCGGCGGCGCCACGCTGCACGAGCTGGCAGACGAATTCGGCGTGTCTGCCGAGCGCATCCGTCAGATCGAAGTCGCCGCAATGAAGAAGATGAAGGGCGCGCTGCAAGCCTCGGCGTAA
PROTEIN sequence
Length: 313
LSTAATLHPTTPATGTAPTSRALAFAPSALMLPGSLGNIESYIQAVHRIPLLTAEEEQSLAKRLRENDDLEAARQLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPTQGVRLVSYAMHWIKAEIHEYVLRNWRTVKVATTKAQRKLFCNLRSQKQGLQAFTPDEIDQVARDLNVKREDVVEMETRMSGGDIALEGHSDDSDSASFAPIAYLADSHQEPTAVIAARERDRLQSDGLQTALGRLDARSRRIIEARWLSVADDGSGGATLHELADEFGVSAERIRQIEVAAMKKMKGALQASA*