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SCNpilot_cont_500_bf_scaffold_14534_3

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: 2040..2870

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034589C6 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 550
  • Evalue 7.00e-154
Fis family transcriptional regulator {ECO:0000313|EMBL:ESH88438.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 294.0
  • Bit_score: 371
  • Evalue 1.40e-99
two component, sigma54 specific, Fis family transcriptional regulator; K10126 two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 275.0
  • Bit_score: 342
  • Evalue 1.20e-91

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Taxonomy

Cupriavidus sp. HPC(L) → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
GTGCTGGTGTTCGGCGAGACGGGCACCGGCAAGGAACTGGTTGCGCGCTGCCTGCACGACTTCGGCCCGCGCCGCGACAAACCCTTTGCCGCGCTGAACTGCGCGGGCCTTCCCGAATCGCTATTCGAGAGCGAAGTGTTCGGCCATGAGGCTGGCTCGTTCACGGGGGCGTTGAAACGTCGCATCGGCAAGCTGGAATATGCGCAGGCCGGCACGCTCTTTCTCGACGAGATCGAGACGATGCAGATGGCACTTCAGGTCAAGTTCCTGCGTGTGCTTCAGGAGCGCCAGTTCGAGCGGATTGGCTCGAACGAACTGCTGCCGATGAATTGCCGGATCATTGCCGCGACGAAGGCGGATCTGCTCGAGCTCGCCCGCCAGCAGCGGTTTCGCGACGATCTCTACTATCGGCTTGGGGTGATCGTGCTCGAGATCCCCTCGCTACGGGAGCGTCGGGAAGACATTCCGCTGCTGTTCGAGCACTTTGTGCTGCGGGCGGCGGCGGCGTACGGTCGTCCGGTGCCGGAGATCGGCGCCGAGCGTCTGAATCGGCTGATGGCGCGCCCGTGGCCCGGAAACGTGCGCGAACTGTGCAACGTCGCCGAGCGCTTTACGCTCGGACTCGGGACCGGAGATCCGGACGACGGCCCGCAGGGGACGCCGCGCACGCTCGACGAGCAGATGAACCTGTTCGAGCGGCGTTTCATCGAAGAGGCGTTGCGCGCGTCCGGCGGACGCGCATCGCTCGCTTGCGAAAAGCTGGGCATTCCCCGAAAGACCTTGTACGACAAGATGCGGCGCCTCGGCATCGCGTCCGATGATTTCAAGTGA
PROTEIN sequence
Length: 277
VLVFGETGTGKELVARCLHDFGPRRDKPFAALNCAGLPESLFESEVFGHEAGSFTGALKRRIGKLEYAQAGTLFLDEIETMQMALQVKFLRVLQERQFERIGSNELLPMNCRIIAATKADLLELARQQRFRDDLYYRLGVIVLEIPSLRERREDIPLLFEHFVLRAAAAYGRPVPEIGAERLNRLMARPWPGNVRELCNVAERFTLGLGTGDPDDGPQGTPRTLDEQMNLFERRFIEEALRASGGRASLACEKLGIPRKTLYDKMRRLGIASDDFK*