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SCNpilot_cont_500_bf_scaffold_16938_2

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: 2952..3752

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:AJE99475.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pan similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 266.0
  • Bit_score: 544
  • Evalue 6.80e-152
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 265.0
  • Bit_score: 418
  • Evalue 1.30e-114
  • rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C6368 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 266.0
  • Bit_score: 560
  • Evalue 8.50e-157
  • rbh

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGCGAATCGCACTGGGCATCCATTACGACGGCACGGCGTTCTCCGGCTGGCAATCGCAGCCGCATGGCAACACCGTGCAACAGACGCTCGAAGCCGCGTTGCGGGACTTCGGCGGCGTTGCGCTGCCCACGACCGTCGCGGGCCGCACCGATACCGGTGTGCACGGCATCGGTCAGGTGGCACATTTCGACACCGACCTGGACCGCGCCATGTTCTCGTGGGTGCGCGGCGTCAACGCGTTTCTGCCCAAGACGGTTGCGGTGCAATGGGCGCAGGCCATGCCGGACGATTTCCACGCCCGATTTACCGCCTTCGAGCGCACGTATTTCTATGTGCTGTACGTGCATCCCGTGCGCTCACCGTTGCTTGAGGGCCGATGCGGCTGGCTGCACACGCCGCTCGATATCGACGCCATGCGCGCCGCGAGTCGAGTGCTGGTCGGCGAGCACGACTTCTCGGCGTTCCGCTCGTCCGAGTGTCAGGCCAAGACGCCGGTGAAACATCTGTATGCCATCGACATCGAGCAGCATGGGCACTTCTTTGTGTTCCGCTTCCGGGCGAGCGCGTTCCTGCATCACATGGTGCGAAATATCATGGGCTGTCTGGTCGCCGTGGGCCGAGGCCGCCAGCCGGCGAGCTGGATGACGGATGTGCTCGCGAGTCTCGACCGTCGTCAGGCGGCACCGACGTTCATGCCGGACGGGCTGTATCTGGCGCGGGTGGGGTATCCTGAGCGTTTCGCGGTCCCCGAGCCCAACTGGGCGGCGTGGCCGTTCCCGATGCCGTGGGCAAGTTCATGA
PROTEIN sequence
Length: 267
MRIALGIHYDGTAFSGWQSQPHGNTVQQTLEAALRDFGGVALPTTVAGRTDTGVHGIGQVAHFDTDLDRAMFSWVRGVNAFLPKTVAVQWAQAMPDDFHARFTAFERTYFYVLYVHPVRSPLLEGRCGWLHTPLDIDAMRAASRVLVGEHDFSAFRSSECQAKTPVKHLYAIDIEQHGHFFVFRFRASAFLHHMVRNIMGCLVAVGRGRQPASWMTDVLASLDRRQAAPTFMPDGLYLARVGYPERFAVPEPNWAAWPFPMPWASS*