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SCNpilot_cont_500_bf_scaffold_31250_1

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: comp(388..936)

Top 3 Functional Annotations

Value Algorithm Source
exported transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 183.0
  • Bit_score: 143
  • Evalue 9.10e-32
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A4B6C similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 182.0
  • Bit_score: 344
  • Evalue 5.00e-92
Lytic transglycosylase {ECO:0000313|EMBL:AJE97045.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 193.0
  • Bit_score: 279
  • Evalue 3.60e-72

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCGCCTCAAGGCGGGCTCGACGTTGCTGGTGCCGCGCTCGGACGACATTGACCAGGACATCAGCGCGTCGGTAGCACGCAATGCCGTGCTTGCGCTGGAGCCGGATATTCCCGATACGCGCAAGGTGATGGTGCGCGCTCGCAAGCACGACACGCTTGCCCGCGTGGCCCAGCGCAGTGGCGTGAGCGTCGCACAGATCAAGAGCTGGAATCGTCTGCGTCGCGATACGCTCACGTCGGGCCAACTGCTGGTGCTTCACGTACCGGTCAAGGACGCCTTGCGCGTGGCGGCTGCGTCCGAGGCCCCGGCGGCCACGGGCGACGGCGAAGCGCCGCGTACGCGTCTGGTGCGCGGCAAGCATGGCAAGATAATCCGCGTGGTGGAGCGTCGGCCGGCCAAGGCTGCCGTCGCTGACAATAGGACCGCAACGGCCAAGGTGGCATCGAAGGGGCGGGCGAAGGCCCCTGCGAAGACAGTCGCCAAGATGGCTTCGAAGCCCACCGCCAAGAAGGCACCTGCGAAGGTGACCAAGACGGCACAACGCTGA
PROTEIN sequence
Length: 183
MRLKAGSTLLVPRSDDIDQDISASVARNAVLALEPDIPDTRKVMVRARKHDTLARVAQRSGVSVAQIKSWNRLRRDTLTSGQLLVLHVPVKDALRVAAASEAPAATGDGEAPRTRLVRGKHGKIIRVVERRPAKAAVADNRTATAKVASKGRAKAPAKTVAKMASKPTAKKAPAKVTKTAQR*