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SCNpilot_cont_500_bf_scaffold_33343_3

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: comp(1549..1809)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 86.0
  • Bit_score: 171
  • Evalue 5.10e-40
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 91.0
  • Bit_score: 102
  • Evalue 5.00e-20
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000367EABC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 185
  • Evalue 1.90e-44

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTTCATCTCTCGCACCTCGGCCATGCGCTGTTGGGCGATCCCCTCTACAAACCCCGTCACAAACGACCGGTGTTGCCGGGCGATTTTGCGCGTCAGGCGCTGCATGCCTGGCGATTGGGGTTGATTCATCCCGAGGATGGCCGTCTCGTGCACTGGCAGGCACCTTTGCCGGATGACCTGCGTGCGCTCGTGGCCGCGCTCGGGCTCGAGTTCGATTTTTCAACGCTCCCCGATTCGCTCGATGACTTCTTCCCTGCCTGA
PROTEIN sequence
Length: 87
VHLSHLGHALLGDPLYKPRHKRPVLPGDFARQALHAWRLGLIHPEDGRLVHWQAPLPDDLRALVAALGLEFDFSTLPDSLDDFFPA*