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SCNpilot_cont_500_bf_scaffold_35294_3

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: comp(2318..3223)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B8330 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 301.0
  • Bit_score: 583
  • Evalue 1.40e-163
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AHB76469.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 296.0
  • Bit_score: 507
  • Evalue 1.40e-140
lysR; putative transcriptional regulator, LysR similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 293.0
  • Bit_score: 299
  • Evalue 1.30e-78

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Taxonomy

Pandoraea sp. RB-44 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAAGTTCAAGCAGGTGGAAGCGTTCAGGGCGGTGATCCAGACCGGGTCGATGACGGCGGCGGCGGATGCGTTGCATACGTCGCAGCCGAATATCAGTCGCTTGGTCGGGCAACTCGAGCAGAGCGTCGGGTTCCGGCTGTTCGAGCGGATCAACGGGCGGCTGCAGCTGACGGACGAGGGCGCCGAGTTGTTTCGCGACGTCGAGCGTGCGTTCGTGAGTCTGAAGAGTCTGGAGGATTCGGCTGCACAGATTCGACGCTCGGGGACAGGCCGGTTGCGCGTCGGCGCGGTGCCGTCGATTGCGCTCACGCAAATGCCGGTGGTCATTCGGCGGTTTCGCGAAGCGCATCCAGGCGTGGCCGTCTCGCTGCTCACCAACGATTCGCCGCGCGTGGCGCAATGGGTCGCGTCTCAGTTTTGCGACCTCGGCGTGGTGGCTTATGTCAGCCGCGACGTGTCGGGTATCGAGGCGACGACGATTCGCGACGTGGCCGGTGTTTGCGCTTTTCCGGCCGGGCATCGGTTGGGCGAGCGCGATATCGTCACTCCTGCCGATCTCGAATACGAGCCGTTCATCGCGCTGTCACTCGTCGACGGAACGCGCATGAGGATCGATCAACGCTTTCGTGAGGCAGGCGTCACGCTACGTCACAAGGAACTTGAAACGCCGTACGAAGCGACGGTGTGCGCGATGGTTGCTGGCGGGTTGGGTGTGAGCATCGTGAGCGAGTCGGTCGCGCGGGCCTATGCGGGGCGCGGCCTCCTCGACTATCGGCGGTTCGTGCCGGACGTGCCGTTCACGACGCACTTGCTGCGACCGCTGCACGCGCCGCAAAGCTTGCTGGCGCAGCGGTTTGCGGACACGTTGCGCGCCGTGGTGGGAGGCGACACGCCTGTCGCCTAG
PROTEIN sequence
Length: 302
MKFKQVEAFRAVIQTGSMTAAADALHTSQPNISRLVGQLEQSVGFRLFERINGRLQLTDEGAELFRDVERAFVSLKSLEDSAAQIRRSGTGRLRVGAVPSIALTQMPVVIRRFREAHPGVAVSLLTNDSPRVAQWVASQFCDLGVVAYVSRDVSGIEATTIRDVAGVCAFPAGHRLGERDIVTPADLEYEPFIALSLVDGTRMRIDQRFREAGVTLRHKELETPYEATVCAMVAGGLGVSIVSESVARAYAGRGLLDYRRFVPDVPFTTHLLRPLHAPQSLLAQRFADTLRAVVGGDTPVA*