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SCNpilot_cont_500_bf_scaffold_2417_12

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: 11944..13107

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance protein mdtA n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYS5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 50.1
  • Coverage: 339.0
  • Bit_score: 326
  • Evalue 3.90e-86
Multidrug resistance protein mdtA {ECO:0000313|EMBL:EGY01575.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 339.0
  • Bit_score: 326
  • Evalue 5.50e-86
hlyD; secretion protein; K07799 putative multidrug efflux transporter MdtA similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 372.0
  • Bit_score: 321
  • Evalue 5.20e-85

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
GTGAGGCGCGGCGGTCATGCGACCGGCCTCGGCGTGGTCCTGACCGCGCTCCTCCTCCTGTCCGCCAGCCCGCCCACGCCCGCCGCCGCGCAGGCCACCTCCACCGCTTCGTCGGCGCCACATGCCGCCCCCGCCGGGGTGCCGGTCAGCGTCGCCACCGTCACCCGCGCGGACGTCCCGATCTGGATCCGCGCGCTCGGGTCCGTGCAGGCCTTCTACGCGGTCCAGCTCCGCAGCCGGGTCGACGGAACCCTGACCGAGGTGCCGGTCACCGAGGGGCAGGAGGTCCGCAAGGGCGACGTGCTCGCGGTGATCGATCCCCGCCCCTACCAGGCCGCGCTCGATGCCGCCCTGGCCAAGAAGGCGCAGGACGAGGCGCAGCTCTCCACCGCCTCCGCCGACGTCACCCGCTACACCGCGCTCGCGAAGGAGGAAGTGGCCTCCCGCCAGAAGCTCGAAGTGGTGATGGCGCTCGCCAAGCAGCTCCGCGCCGCGATCGTCGGTGACGACGCCCAGATCGAGGCCGCGCAGCTCAACCTCAGCTACTGCTACATCACCGCGCCGTTCGACGGCCGGGTCGGGCTGCGCACCGTCGATCCCGGCAACCTCGTGCGCGCCGCCGAGGGCACGGCCATCATGACCCTGGCGCAGCTCAAGCCGATCAGCGTCACCTTCGCCGTGCCGCAGGACAACCTGCCCGCGCTCGCCGCGGCGATGGCACGCGGCAAGCCGGAGGTCGTGGCGCGGTCCAGCGACGAGAAGGCGGAGCTCGACAAGGGTACCCTGCTCACGGTCGACAACGCGATCGACGCGGCCACCGGCACGATCCGGGCCAAGGCGACCTTCCCCAATCCGGACAACCGGCTCTGGCCCGGCCAGTTCGTCAATATCCGCGTGCTGGTGGGCACCGACGAGAACGTGCTCACCGTGCCCTCCCCCGCCGTGCAGCACGGACCGAACGGGCTCTACGTCTACGTCGTGAAGCCCGACGACACCGTCGCCCGCGAGACGGTCGAGATGGCCCGCGACGACGGCGAGACCGCGATCATCGCGCGCGGCGTGCAGGAGGGCCAGCGCGTGGTCGTGGACGGCCAGTCCCGCCTGCAGGCCGGCGCCCGGGTCGCGGTGGCCACGACCAGGACCGCCGCCAAGCCCGGAACCTGA
PROTEIN sequence
Length: 388
VRRGGHATGLGVVLTALLLLSASPPTPAAAQATSTASSAPHAAPAGVPVSVATVTRADVPIWIRALGSVQAFYAVQLRSRVDGTLTEVPVTEGQEVRKGDVLAVIDPRPYQAALDAALAKKAQDEAQLSTASADVTRYTALAKEEVASRQKLEVVMALAKQLRAAIVGDDAQIEAAQLNLSYCYITAPFDGRVGLRTVDPGNLVRAAEGTAIMTLAQLKPISVTFAVPQDNLPALAAAMARGKPEVVARSSDEKAELDKGTLLTVDNAIDAATGTIRAKATFPNPDNRLWPGQFVNIRVLVGTDENVLTVPSPAVQHGPNGLYVYVVKPDDTVARETVEMARDDGETAIIARGVQEGQRVVVDGQSRLQAGARVAVATTRTAAKPGT*