ggKbase home page

SCNpilot_cont_500_bf_scaffold_3164_10

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: comp(10295..11179)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component I n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL48_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 294.0
  • Bit_score: 420
  • Evalue 1.50e-114
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:EIM24690.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 294.0
  • Bit_score: 420
  • Evalue 2.10e-114
binding-protein-dependent transporters inner membrane component similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 289.0
  • Bit_score: 413
  • Evalue 7.60e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
TCCCTGCGGTATGCGCCGTCCATGCGGACACGGCTGCGCAACCGCGGGCTCGATGGCGTGACGCTGCTGGTGATCCCCGGCGTGCTGTTCGTGGTCGCGCTGTTCGTCTACCCGTTCCTCTACGGCCTGCTGCTCTCCTTCGAGCCGAAGGAAGGTGGCTGGCTCGCCAACTACGTGACGTTCTTCTCCGACCCGTTCCTCTACGACACGATCGGGAAGACCCTGCTGATCGCGATCCCGGCGACCCTGCTGAACGTCGTGCTGTCGATCCCGGTCGCCATGCGCGTGCGGCTGATGCGGCACCAGAAGCTGCTGACGACGATCCTGGTGATCCCGATCACACTGGGGACCGTGCTGGTGGCCGAGGGGCTGCTGACCTATCTCGGCCCGCGCGGCTGGGTGAACCGCGTGCTGCTGGAATTCGGCCTCGCCGAACACCCGATCCGGCTCGTGCACAACTACTGGGGCGTGATGCTGTCGCTGATCATCAGCGGCTTCCCGTTCACCTTCCTGCTGACGCTCTCCTACGTCACCGGCATCGACCCGGCGCTCGAGAACGCGGGCGCCATGCTGGGGGCCCGCGCGCGGGAACGGTTCTTCCGCATCATCCTGCCGCTGCTGGTGCCCGGTCTCGCGATCACGCTCGCGCTCTCCTTCGTGCAGGCCTTCTCCGTCTTCCCCTCGGCCGTGCTGCTGGGCGCACCCGCCGGGCCGACGCGGGTGATCTCGATCGCCGCTTATACCGCGGCCTTCGAGCAGTACGACTACTCCATGGCCTCGGCCATCGCGATGATCATGGCGGCGGTGCAGGTGCTGATCGTCGTCGCCCTGCTGGGCGCACGCACGCTCGTCTTCCGCGGGCCGGCCAGTTCGGGGAAGGGCTGA
PROTEIN sequence
Length: 295
SLRYAPSMRTRLRNRGLDGVTLLVIPGVLFVVALFVYPFLYGLLLSFEPKEGGWLANYVTFFSDPFLYDTIGKTLLIAIPATLLNVVLSIPVAMRVRLMRHQKLLTTILVIPITLGTVLVAEGLLTYLGPRGWVNRVLLEFGLAEHPIRLVHNYWGVMLSLIISGFPFTFLLTLSYVTGIDPALENAGAMLGARARERFFRIILPLLVPGLAITLALSFVQAFSVFPSAVLLGAPAGPTRVISIAAYTAAFEQYDYSMASAIAMIMAAVQVLIVVALLGARTLVFRGPASSGKG*