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SCNpilot_cont_500_bf_scaffold_18507_4

Organism: SCNPILOT_CONT_500_BF_Legionella_38_4

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 9 / 38
Location: comp(2655..3761)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase beta' subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 368.0
  • Bit_score: 691
  • Evalue 1.40e-196
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 368.0
  • Bit_score: 691
  • Evalue 6.20e-196
DNA-directed RNA polymerase subunit beta'''' n=2 Tax=Fluoribacter dumoffii RepID=UPI00031F5A20 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 368.0
  • Bit_score: 698
  • Evalue 4.70e-198

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Taxonomy

Legionella longbeachae → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
GTCGATTTAATTGATGGTATTACCATGAATCGACAAACTGACGAATTAACAGGTTTGAGTAATATTGTAGTTATTGACGCAAAACAACGAAGTGCTGCGGGTCGTGATTTACGTCCTATGGTAAAACTTGTTGCTGAGAATGGTGATGATATTTATCTGGCTGGTACCAATGTTCCTGCCCAATATTATCTACCTGTGGATGCGATCGTTAATTTTGAAGATGGCAATCACGTGGGCATTGGAGATGTTATTGCACGTATTCCTCAAGAGCGTTCTAAGACACGTGATATTACAGGGGGTCTACCAAGGGTAGCCGACTTGTTTGAAGCACGTAAGCCTAAAGATTCAGCGGTTATGGCTGAAGTTTCAGGAATGGTTAGCTTTGGTAAGGAAACAAAAGGTAAGAGAAGATTAATTATTAATGTTTCTGAAGACCAATGTCATGAAGAATTGATTCCTAAGTGGAGACATATTTCCGTCTTCGAGGGAGAGCATGTTGAGCGCGGTGAAATTATCGCTGAAGGTGCACTCAATCCGCATGATATCTTACGATTACTTGGTGTTGGTGCATTAGCTAATTACATTGTAAATGAGGTACAAGACGTATATCGTTTACAAGGTGTAAAAATTAATGACAAACACATCGAAACAATTGTACGACAAATGCTACGTAAGCGTGTGATTACTTTTGCTGGGGATTCAAAATTCTTAGCAGGGGAGCAGATTGAAGAAAGCGTCTTGTTGCAAGAAAATGACAAACTTATTGCTGATGGAAAACAAACTGCCAGAGGGACACCTATATTACTGGGTATTACAAAGGCATCTTTGGCAACTGAGTCATTTATTTCAGCTGCTTCATTCCAGGAAACAACAAGAGTTCTAACTGAAGCTGCTGTGAGTGGTAAAGTTGATGATTTACGTGGGTTAAAAGAAAACGTGATGGTTGGTCGCTTGATTCCTGCTGGAACAGGTTACGCGTATCATCAAAGCCGTAAGGCAAAAAGAGCTAAGGCTGCAGCCGGTGAGCACCCAGTGCATACCGTTACTGCAAGTGATGTTGAGCATGCGTTAAGTGAAGCATTAAACGCAGATAATCAAGAGCACTAA
PROTEIN sequence
Length: 369
VDLIDGITMNRQTDELTGLSNIVVIDAKQRSAAGRDLRPMVKLVAENGDDIYLAGTNVPAQYYLPVDAIVNFEDGNHVGIGDVIARIPQERSKTRDITGGLPRVADLFEARKPKDSAVMAEVSGMVSFGKETKGKRRLIINVSEDQCHEELIPKWRHISVFEGEHVERGEIIAEGALNPHDILRLLGVGALANYIVNEVQDVYRLQGVKINDKHIETIVRQMLRKRVITFAGDSKFLAGEQIEESVLLQENDKLIADGKQTARGTPILLGITKASLATESFISAASFQETTRVLTEAAVSGKVDDLRGLKENVMVGRLIPAGTGYAYHQSRKAKRAKAAAGEHPVHTVTASDVEHALSEALNADNQEH*