ggKbase home page

SCNpilot_cont_500_bf_scaffold_28204_1

Organism: SCNPILOT_CONT_500_BF_Legionella_38_4

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 9 / 38
Location: comp(2..1636)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 546.0
  • Bit_score: 1038
  • Evalue 0.0
rpoC; RNA polymerase beta' subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 545.0
  • Bit_score: 1037
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=2 Tax=Fluoribacter dumoffii RepID=UPI00031F5A20 similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 545.0
  • Bit_score: 1052
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Legionella drancourtii → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1635
ATGACATTAAGAGACATTGAACGTGTTCTTTATTTTGAAGCGTTTGTTGTTGTTGATCCAGGAATGACTGAACTAGAGCGTGGTCAATTGCTCAATGATGAAGTATATCTTGATGCAATGGAACAATATGGTGATGAGTTTGATGCACGTATGGGTGCTGAAGCAATTCGTGATTTGCTGCGCCAAGTTGATTTGGAAGAGGAAATCAAGAGTTTACGCGAAGAGTTACCAACTACCAGTTCAGAAACAAAAATTAAAAAAATCACTAAAAGATTAAAACTGCTCGAAGCATTTTATGAGTCTGGTAATAAGCCAGAGTGGATGATTATGGATGTATTGCCTGTTCTTCCACCTGATTTAAGACCGCTAGTACCATTAGATGGTGGACGTTTTGCCACGTCAGATCTTAATGACTTGTACCGTCGTGTTATCAATAGAAACAATCGCCTGAAGAGACTTCTGGATCTAAATGCACCTGATATTATCGTGCGTAACGAAAAGAGAATGCTACAAGAATCAGTTGATGCGCTATTGGATAACGGCCGTCGTGGTCGTGCGATTACGGGTACTAACAAGAGACCACTCAAATCCTTAGCAGATATGATTAAAGGGAAACAAGGTCGTTTCCGTCAAAACCTATTGGGTAAACGTGTTGATTATTCGGGTCGTTCTGTAATTGTCGTGGGACCAACTTTGAAACTGCATCAATGCGGTCTTCCAAAGAAAATGGCTCTTGAATTATTTAAGCCATTCATATTCAGCAAACTTGAATTCCGTGGTTTGGCTACAACAATTAAAGCTGCCAAGAAAATGGTTGAGCGTGAAGAGTCAGTTGTTTGGGATATCCTAGACGATGTGATTCGTGAACATCCGATTTTGTTAAACCGTGCTCCTACGCTACATAGACTCGGTATTCAGGCATTTGAACCGGTATTAATTGAAGGTAAGGCGATTCAACTGCATCCTTTAGTTTGTACCGCGTATAACGCTGACTTCGATGGTGACCAAATGGCGGTTCACGTGCCATTGACTTTGGAAGCACAATTAGAAGCTCGTTCCTTAATGATGTCGACTAACAATATTTTGTCACCCGCGAGCGGTGAGCCAATTATTGTTCCCAGCCAGGACGTTGTACTTGGTTTGTATTATTTAACTCGTGAAAAAGTTAATGCATTAGGCGAAGGTAAGATTTTTGTTAGTGCTCAAGAAGCGCAGAATTTTTACGAGTCAGGTCATCTTGATATCCATGCTAAAATTAAAATCCGTATGGCAAAAGAAGACGGACCAGGGCACCATTTGGTAGAAACAACAGTTGGTCGTGCAATTCTTGCTGAGGTTTTACCTAAAGGTATGACCTTTGCGCAGATAAACCGTACCATGACCAAAAAAGTAATTACTAAGGTTATTGATACCTGTTATAGAAATTTTGGTTTGAAAGAAACTGTAATTTTTGCTGATAAGTTAATGTACACTGGCTTCAAGTATGCAACACGTTCTGGTATATCAATAGGTATTGAGGATATGGAAATACCTGATGACAAAGCCAGCATTATTGAGCATGCAGACAACGAAGTTCGGGAAATTGAATCTCAATTCCGTTCGGGTTTGGTAACCAATGGCGAACGTTACAACAAA
PROTEIN sequence
Length: 545
MTLRDIERVLYFEAFVVVDPGMTELERGQLLNDEVYLDAMEQYGDEFDARMGAEAIRDLLRQVDLEEEIKSLREELPTTSSETKIKKITKRLKLLEAFYESGNKPEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKKMALELFKPFIFSKLEFRGLATTIKAAKKMVEREESVVWDILDDVIREHPILLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAYNADFDGDQMAVHVPLTLEAQLEARSLMMSTNNILSPASGEPIIVPSQDVVLGLYYLTREKVNALGEGKIFVSAQEAQNFYESGHLDIHAKIKIRMAKEDGPGHHLVETTVGRAILAEVLPKGMTFAQINRTMTKKVITKVIDTCYRNFGLKETVIFADKLMYTGFKYATRSGISIGIEDMEIPDDKASIIEHADNEVREIESQFRSGLVTNGERYNK