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SCNpilot_cont_500_bf_scaffold_3958_4

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(2756..6232)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 999.99
  • Bit_score: 2129
  • Evalue 0.0
dnaE; DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 999.99
  • Bit_score: 1899
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLB9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 999.99
  • Bit_score: 2129
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3477
ATGTCCAAAACCGCCACGCCGAAATCCGGGTCGGACCCCGGCTTTATCCATCTGCACGTGCAGTCGGCATTCTCGCTGCTGCAGGGATCGATGACGATCGCCAAGCTGCTGGAACTCGCCAAGGCGGACCATCAGCCGGCGCTGGCGCTGACCGACAACGACAACATGTTCGGCGCGCTGGAGTTTTCCGAGAAGCTGGCGGGCTATGGCATTCAGCCGATCATCGGCTGCGCGGTCGCGGTGGATTTCGGCGATCAGGATCCGGCGGCGCGCAATGCGCTGGCCCCTGCGCGGATCGTCCTGCTCGCGGCGAGCGAGAAGGGCTACGGCAGCTTGATGCGGCTGAACTCCCGGGCCTTTCAGGAAACACCGGTCAATCAGGCGGCGCATATCAAGGCCGAGTGGCTGGACGGAGAGACGGATGGTCTCATCGCGTTGACCGGCGGGCCGGAAGGAACGCTGGCTCAGGCCATCAATGCCGAGCAGCCGGCGGTGGCGCAGGCGCGTTGCGACACGTTGATGAAGCTGTTTGGCGACCGGCTTTACATCGAGTTGCAGCGCCATGGCCTTGACGAAGAGCGCCGTTGCGAGTCTGCGCTGATCGACATGGCCTATGCGAAGGGCCTGCCGCTGGTCGCGACCAACCAGCCCTATTTCGCCAGCACCGAGGATTACGAAGCGCACGATGCACTGCTGTGCATCGCGGGCGGACGGCTGGTGTCCGAAACCGACCGCCATCAATTGACGCCGGACCATCGCTTCAAGACGCGCGCCGAGATGGCCGTGCTGTTCGCCGATCTGCCGGAAGCACTGGCCTCCACGGTCGAGATCGCGAAGCGCTGCGCGTACCGGCCGCGCACGCGCAAGCCGATCCTGCCGCGATTCACCGTGGGCGGCGACAATGCCGCCGACGCCGAGAGCGCGGAAGCCGCTGAACTGCGCCGCCAGGCCGAGGAGGGCCTTGCCTGGCGCTTGCAGAAATACGGTCTGGCTCCGGGCACCACGGAAGAGGACTACGCAAAGCGGCTGGCGTTCGAGATCGATGTCATCACCCGGATGAAATATCCGGGCTACTTCCTGATCGTGTCCGACTTCATCAAGTGGGCCAAGGCGCAGGATATTCCGGTGGGGCCGGGCCGTGGCTCGGGCGCGGGATCGCTGGTCGCCTATGCGCTGACGATTACCGACCTCGATCCGATCCGCTTCGGCCTGCTGTTCGAGCGCTTCCTCAATCCGGAGCGCGTGTCGATGCCGGACTTCGACATCGACTTCTGTCAGGACCGCCGCGGCGAAGTGATCCGCTACGTGCAGGAGCGCTACGGACGCGATCAGGTCGGCCAGATCATCACCTTCGGTACCCTGCAGGCGCGCGGCGTGCTGCGCGACGTCGGCCGCGTGCTGCAGATGCCTTACGGGCAGGTGGACCGGCTCACCAAGCTGGTGCCGCAGAATCCTGCTGCGCCGGTGACGCTCGCGAAAGCCATCGAAAGCGAGCCGAAACTGCAGGCGTTTCGCGACGAAGACCCGGTGATCGCGCGCGCCTTCGACATTGCGCAGCGCCTCGAAGGCCTGACACGCCACGCCTCGACCCATGCGGCGGGCATCGTGATCGGCGACCGGCCCTTGAGCGAACTGGTGCCGATGTATCGCGATCCGAAGTCGGACATGCCGGTCACCCAGTTCAACATGAAATGGGTCGAGCCTGCTGGCCTTGTGAAGTTCGACTTTCTTGGCCTGAAGACGCTGACCGTACTCGATGTCGCCGTGAAGCTGCTCAGGCAGCGGAACAAGGAGGTCGATCTCGCGCATCTGCCGCTCGACGACAAGGACAGCTACGACATGCTGTCGCGCGGTGAAGTGGTCGGCGTGTTCCAGGTTGAAAGTCAGGGCATGCGCCGCGCGCTGGTGGACATGCGGCCGGACCGTCTTGAAGACTTGATCGCGCTGGTCGCGCTGTATCGCCCGGGTCCGATGGCGAACATTCCGACTTACTGCGCGCGCAAGCACGGCGACGAAGAGTCGGAATATATGCATCCGATGCTCGAGCCGATCCTGAAAGAAACCTTCGGCGTCATCATCTATCAGGAACAGGTAATGCAGATCGCGCAGGTGATGGCGGGCTATTCGCTCGGCGACGCCGACCTTCTGCGCCGCGCGATGGGCAAGAAGATCCGCGCGGAAATGGACAAGCAGCGCGAGATTTTTGTCGCGGGCGCGACCAAAAACAATGTGCCGAAAGGGCAGGCGGAAACGATCTTCGAGCTGCTGGCGAAGTTCGCGGACTACGGCTTCAACAAGAGCCACGCCGCGGCCTACGCGCTGGTGTCGTTCCAGACCGCCTATATGAAGGCGCACTATCCGGTGGAGTTCATCGCGGCGTCGATGACCCTCGATATGAACAACACCGACAAGCTGTCGGAATTCCGCGCCGAAGCCCAGCGGCTCGGGATCAAGGTCGAGCCGCCGTCGATCAACCGTTCGGGCGCGACTTTCGAAGTCAGCGAGAACACGATCTACTACGCGCTCGCCGCGCTCAAGGGCGTCGGCCAGCAGGCCGTGGAAATGATCGTGGAAGCGCGCGGCGACCGGCCGTTTACCTCGCTGGCAGATTTCGCCTCGCGCGTCAGTCCGCGCGCGATCAACAAGCGCGTGGTGGAAAGCCTCGCGGCGGCAGGGGCCTTCGATTGCCTCGATTCAAACCGCGCGCGCGTCTTCGCCGGTGCGGACGCAATCATTGCCGCATGCCAGCGCAACCACGAGGCCGCGACCAGCGGACAGAACGACATGTTCGGCGGCATGGCCGATGCGCCGAGCATCGTGCTGCCGAACATCGAGCCGTGGCTGCCCGCCGATCGGCTGCGGCGCGAATACGACGCCATCGGCTTCTTCCTGTCGGGCCATCCGCTCGATGACTATGCGACGGCGCTCAAGCGCCTGCGCGTGCAGTCGTGGGCCGAGTTCTCCCGTGCGGTGAAGACCGGCGCGACGGCAGGACGCGTGGCGGCGACGGTGGTCTCGCGCATGGAGCGGCGCACCAAGACCGGCAACAAGATGGGCATCATGGGCCTGTCCGATCCCACCGGTCATTTCGAGGCGGTGCTGTTCTCCGAAGGGCTTGCGCAATATCGCGATGTTCTCGAGCCGGGTTCGGCGGTGCTGCTGCAACTCGGCGCGGAACTTCAGGGGGAGGACGTGCGCGCGCGCGTGCTGCATGCCGAGCCGCTCGATGCCGCCGCGGCCAAGACCACGTCCAGCCTGCGCATCACGGTGCGCGACGACAAGCCGATTGAATCGATCCACAAGCGGCTCGGCATGGCGCCGCCCGGCGCGGCGTCGTCCGGCGAGATCATCGTGGAAATGATCCTCGACATGCAGACCTCGGTGGAGATCAAGCTGCCGGGGCGGTTTCCGGTCTCGCCGCAGATCGCCGGGGCGCTTAAAGCCGTGGCCGGTGTGGTGGATGTGCAGACGGTGTGA
PROTEIN sequence
Length: 1159
MSKTATPKSGSDPGFIHLHVQSAFSLLQGSMTIAKLLELAKADHQPALALTDNDNMFGALEFSEKLAGYGIQPIIGCAVAVDFGDQDPAARNALAPARIVLLAASEKGYGSLMRLNSRAFQETPVNQAAHIKAEWLDGETDGLIALTGGPEGTLAQAINAEQPAVAQARCDTLMKLFGDRLYIELQRHGLDEERRCESALIDMAYAKGLPLVATNQPYFASTEDYEAHDALLCIAGGRLVSETDRHQLTPDHRFKTRAEMAVLFADLPEALASTVEIAKRCAYRPRTRKPILPRFTVGGDNAADAESAEAAELRRQAEEGLAWRLQKYGLAPGTTEEDYAKRLAFEIDVITRMKYPGYFLIVSDFIKWAKAQDIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQDRRGEVIRYVQERYGRDQVGQIITFGTLQARGVLRDVGRVLQMPYGQVDRLTKLVPQNPAAPVTLAKAIESEPKLQAFRDEDPVIARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLRQRNKEVDLAHLPLDDKDSYDMLSRGEVVGVFQVESQGMRRALVDMRPDRLEDLIALVALYRPGPMANIPTYCARKHGDEESEYMHPMLEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRAMGKKIRAEMDKQREIFVAGATKNNVPKGQAETIFELLAKFADYGFNKSHAAAYALVSFQTAYMKAHYPVEFIAASMTLDMNNTDKLSEFRAEAQRLGIKVEPPSINRSGATFEVSENTIYYALAALKGVGQQAVEMIVEARGDRPFTSLADFASRVSPRAINKRVVESLAAAGAFDCLDSNRARVFAGADAIIAACQRNHEAATSGQNDMFGGMADAPSIVLPNIEPWLPADRLRREYDAIGFFLSGHPLDDYATALKRLRVQSWAEFSRAVKTGATAGRVAATVVSRMERRTKTGNKMGIMGLSDPTGHFEAVLFSEGLAQYRDVLEPGSAVLLQLGAELQGEDVRARVLHAEPLDAAAAKTTSSLRITVRDDKPIESIHKRLGMAPPGAASSGEIIVEMILDMQTSVEIKLPGRFPVSPQIAGALKAVAGVVDVQTV*