ggKbase home page

SCNpilot_cont_500_bf_scaffold_9877_6

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(4158..4493)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerC n=1 Tax=Afipia birgiae RepID=UPI0003818C8E similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 111.0
  • Bit_score: 211
  • Evalue 5.30e-52
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 111.0
  • Bit_score: 210
  • Evalue 1.70e-51
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 111.0
  • Bit_score: 195
  • Evalue 7.20e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ACCGTGCTGACGCTGATCACGGACTATGTCACGATGTGCCCGCATGTCATCGCGCCGGATACGCCGATCTTTGTCGGTGCGCGCGGCGGGCCGCTGTCACCCCGCATCATTCAGCTCACGATGGAGCGGCTGCGCGGCGCGCTGGGTCTGCCGGACAGCGCAACGCCGCATGCGCTGCGCCATTCCTTCGCCACGCATCTTCTGAGCCGGGGCGGCGACCTTCGCGCCATTCAGGAATTGCTCGGCCACTCGTCCCTGTCCACGACGCAGATCTACACCGGCGTCGATGCCGACCGGCTGCTTGACGTCTACAAGACGGCCCATCCCCGCGCCTGA
PROTEIN sequence
Length: 112
TVLTLITDYVTMCPHVIAPDTPIFVGARGGPLSPRIIQLTMERLRGALGLPDSATPHALRHSFATHLLSRGGDLRAIQELLGHSSLSTTQIYTGVDADRLLDVYKTAHPRA*