ggKbase home page

SCNpilot_cont_500_bf_scaffold_12385_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(1781..2890)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI00030AA0FF similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 375.0
  • Bit_score: 644
  • Evalue 8.10e-182
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33184.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 376.0
  • Bit_score: 638
  • Evalue 8.10e-180
putative hemolysin similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 373.0
  • Bit_score: 544
  • Evalue 2.10e-152
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
GTGCCCGACTCCGACGACAAACCGAACGCGCAACGCGCGGACAATCTGCCGGTTCCCGTGCAGCACGGCGAGGTGCTGCGTCCGTCATCCGAACTGTGGCTGATGCGCGCCCTGCGCTCGCTGTTCGGCTGGAAGGCCGGCTCCGCGCGCGCCGACCTGCAGGTCGTCCTCGACGCCACCGCGCCGGACGAGACCAGCTTCACCACCATCGAGCGCACCATGCTGCGCAACATCCTGGACCTGCACGAGCGGCGCATTGCCGACGTCATGGTGCCGCGCGGTGATATCGTCGCGGTGAAACGGGATATTTCCCTCGGCGAACTGATGAGCCTGTTCGAGAGCGCGGCGCATTCGCGTCTCGTGGTCTACAACGACACGCTCGACGACCCCGAAGGCTTCGTCCACATCCGCGACCTGCTCGGTTTCGTGACGGCGAAGGCGAAGGTGCCGGACGAGGTCAACGCCAAGCGCAAGAAGCCCTTCCCGGCGGGCCTCGATCTCAAGGCAGTGGATCTGCGCACCAAGCTTGCCGACGCCAGCATCATGCGCAAGCTGATCTATGTGCCGCCGTCGATGCCCGCCATTGACCTTCTGGCGCAGATGCAGGCGACGCGCATTCATCTTGCGCTGGTGGTCGATGAATACGGCGGCACTGACGGACTGGTCTCGATCGAGGACATCGTCGAACAGGTGGTCGGCGAGATCGACGACGAGCATGACGGCGATGAAGCGCCGTCGGTCGTCAAACAGGGCGACGGATCGTTCATCGCCGATGCGCGCGCCAGCCTCGAAGACGTCACCTCGATCGTGGGCGAAGCCTTCGACACCGGCGAAGCCGGCGAAGAGGTCGATACGCTCGGCGGCTATCTCGTGACGCAGGTCGGCCGCCTGCCGGTGCGCGGCGAAATCATCTCGGGTCCCGGCGATTTTGAAATCGAAGTGCTCGACGCCGATCCGCGCCGCGTCAAGCGCGTGCGCATTGGCACCCGCAAGGATCGCTCCAACCTGCGCCAGCGCGAAACGCGGCGGCGCGAAGCCGCGGCCGACGCCGCCGCGGCGCAGACCAACGACAATCCGGCCTCGCCGGGCGACGGCACCGGAAACCCATGA
PROTEIN sequence
Length: 370
VPDSDDKPNAQRADNLPVPVQHGEVLRPSSELWLMRALRSLFGWKAGSARADLQVVLDATAPDETSFTTIERTMLRNILDLHERRIADVMVPRGDIVAVKRDISLGELMSLFESAAHSRLVVYNDTLDDPEGFVHIRDLLGFVTAKAKVPDEVNAKRKKPFPAGLDLKAVDLRTKLADASIMRKLIYVPPSMPAIDLLAQMQATRIHLALVVDEYGGTDGLVSIEDIVEQVVGEIDDEHDGDEAPSVVKQGDGSFIADARASLEDVTSIVGEAFDTGEAGEEVDTLGGYLVTQVGRLPVRGEIISGPGDFEIEVLDADPRRVKRVRIGTRKDRSNLRQRETRRREAAADAAAAQTNDNPASPGDGTGNP*