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SCNpilot_cont_500_bf_scaffold_12385_6

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(4299..5756)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 470.0
  • Bit_score: 836
  • Evalue 1.60e-239
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2I2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 470.0
  • Bit_score: 836
  • Evalue 1.10e-239
  • rbh
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 456.0
  • Bit_score: 758
  • Evalue 9.30e-217

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
AAGCTGCACATCAAGTCATACGGCTGTCAGATGAATGTCTACGATGCACAGCGCATGGTGGACACGCTGGCGCCTGAGGGATTCGTGGAGACGGCGAGCGCCGAAGACGCCGACCTTGTCATCCTGAACACCTGTCACATTCGCGAGAAGGCTTCCGAAAAAGTCTATTCGGAACTCGGACGGCTGCGCACGGCGAAGGACGAAGCCGCGCGCAATGGCCGCGAGATGCGCATTGCCGTCGCGGGCTGCGTCGCGCAGGCCGAAGGCAGCGAAATCATCCGCCGCGCACCGGTGGTCGATGTCGTGGTCGGCCCGCAGAGCTATCATCACCTGCCGCAACTGCTGGCGAAGGCGAAAGCCGACGGCCGCGCCATCGAGACCGAATTTCCGGTCGAGGACAAGTTCGCGGCGCTGCCCGATCCGAAGCCCGCAGCAATTCGCGCGCGCGGCATCTCGTCGTTCGTGACTGTGCAGGAAGGCTGCGACAAGTTCTGCACCTTCTGCGTGGTGCCTTACACACGCGGCCTGGAAGTGTCGCGTCCGGTCGCGCGCATCATCGACGACGTGAAGCGCCTCGCTGACAACGGCGTGCGCGAAATCACCCTGATCGGCCAGAACGTCAACGCCTTCCATGGCGAGGGCGAAGACGGCCAGCCTTGGTCGCTCGGCCGGCTGCTGCATCGCCTTGCCGCGATTCCCGGCATCGTCCGCCTGCGCTATTCGACCAGCCATCCCCGCGATGTGGACAATGCGCTGATCGAGGCGCATCGCGACATTCCTGCCGTGATGCCGTTCATCCATCTGCCGGTGCAGTCGGGCTCCGACCGAATTCTCGACGCCATGAACCGCAAGCACACCGCGGCGGACTATCGCCGCATCGTCGACCGGTTCCGCAAGGTCCGCGATGACATTGCATTTTCATCGGATTTCATCGTCGGCTTCCCCGGAGAGACCGAAGAGGATTTTTCGGCCACACTCGCGCTGGTCCGGCAAATCAGCTACGCTGGCGCCTATTCGTTCAAGTATTCGCCGCGCCCCGGTACCCCGGCGGCGGACATGCAGGAGATGGTCACGGCAACGGTAATGGACGAGCGGTTGGCCCGGCTCCAGGACCTGATCGACAGCCAGCAGGCCGCCTTCAACGCGGCCTCCATCGGCAAGACCGTCGACGTGCTGTTTGAACGCGCCGCACGCAATCCCGGCCAGATCGTCGGACGCACCGCCTATCTCCAGCCCGCGCATGTCATGGCCTCGCCCGATATCATCGGCCAGGTGCTGCCGGTCGCGATCGACAGTCTCGAACGCTACAGCCTGATCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCGAGACGTTTCCGCACCTCAAGAAGCCCAGATCGTTGTCGCCTTCGACGATAACGCTGCAACATCGACGCTGGTCGGCCCCTACGGACAGAACCTCGCCTTGA
PROTEIN sequence
Length: 486
KLHIKSYGCQMNVYDAQRMVDTLAPEGFVETASAEDADLVILNTCHIREKASEKVYSELGRLRTAKDEAARNGREMRIAVAGCVAQAEGSEIIRRAPVVDVVVGPQSYHHLPQLLAKAKADGRAIETEFPVEDKFAALPDPKPAAIRARGISSFVTVQEGCDKFCTFCVVPYTRGLEVSRPVARIIDDVKRLADNGVREITLIGQNVNAFHGEGEDGQPWSLGRLLHRLAAIPGIVRLRYSTSHPRDVDNALIEAHRDIPAVMPFIHLPVQSGSDRILDAMNRKHTAADYRRIVDRFRKVRDDIAFSSDFIVGFPGETEEDFSATLALVRQISYAGAYSFKYSPRPGTPAADMQEMVTATVMDERLARLQDLIDSQQAAFNAASIGKTVDVLFERAARNPGQIVGRTAYLQPAHVMASPDIIGQVLPVAIDSLERYSLIGXXXXXXXXXXXTETFPHLKKPRSLSPSTITLQHRRWSAPTDRTSP*