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SCNpilot_cont_500_bf_scaffold_16265_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(1018..1317)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002F2BF17 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 185
  • Evalue 3.60e-44
Uncharacterized protein {ECO:0000313|EMBL:EKS38214.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 99.0
  • Bit_score: 184
  • Evalue 6.70e-44
DNA-binding protein HU 1; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 2.40e-42

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCTAAGAAAGCAGCTACCCCAGCGACGATCACCCTGAAGCACCTTGCCGCGGCGCTTGCCGAAGAGCACGAGCTGTCGAAGAAGACCGCTGAAACCATCCTCGGCGATCTGGTCACCAAGATTACCAAGCACCTGAAGAAGGGCGAGCGGGTCCGTATCGTCGGCCTCGGCATCCTCCAGGTTCGCAAGCGCGCCGCCCGCATGGGCCGCAACCCCGCCACCGGCGAAGCGATCCAGATCAAGGCGAGCAAGAAGGTTGCCTTCCGCGCCGCCAAGGAGCTGAAGGAAGCCATCTAA
PROTEIN sequence
Length: 100
MAKKAATPATITLKHLAAALAEEHELSKKTAETILGDLVTKITKHLKKGERVRIVGLGILQVRKRAARMGRNPATGEAIQIKASKKVAFRAAKELKEAI*