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SCNpilot_cont_500_bf_scaffold_16049_3

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(2203..2808)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 179.0
  • Bit_score: 238
  • Evalue 6.00e-60
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 203.0
  • Bit_score: 233
  • Evalue 4.30e-59
Shikimate kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UIP8_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 191.0
  • Bit_score: 235
  • Evalue 3.60e-59

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGTCCGAGCCCGGAACGGTGACGATCGAGGATGTGGAACCGGTCGAGGCGCGGATCCTGCGCCGTCTCGGCGGCCGCACCATTGCCCTCGTCGGCATGATGGGCGCCGGCAAGTCCTCCATCGGCAAGCGCCTGGCGAGCCGCCTCGGCCTGCCCTTCGTCGATGCCGACACCGAGATCGAGACCGCCGCCAACGCCACCATCCCCGAGATCTTCGAGCGCCACGGCGAGGCCTATTTCCGCGACGGCGAGCGCCGCGTCATCCGCCGCCTGCTCGACGACCGGCCGAAGGTGCTGGCGACCGGCGGCGGCGCCTTCATCCAGCCCGAGACCCGCGCCGCCATCCGCGAGGGCAGCGTCACCATCTGGCTGCAGGCCGACCGCGACCTGATCCTGTCGCGCGTGCGCCGGCGGTCCAACCGTCCGCTCCTCAAGACCGCCGATCCCGCCGCCACCATCGACCGGCTGATCGCCGAGCGCTATCCGATCTATGCCGAGGCCGACGTGCACGTTCAGTCGCGCGACGTCGCCCACGACATCGTCCTCGAAGACATCGTCGGCGGCCTCGCCGCCCACCTCGATCGCGAGCCCGTGGAGGCCGGATGA
PROTEIN sequence
Length: 202
MSEPGTVTIEDVEPVEARILRRLGGRTIALVGMMGAGKSSIGKRLASRLGLPFVDADTEIETAANATIPEIFERHGEAYFRDGERRVIRRLLDDRPKVLATGGGAFIQPETRAAIREGSVTIWLQADRDLILSRVRRRSNRPLLKTADPAATIDRLIAERYPIYAEADVHVQSRDVAHDIVLEDIVGGLAAHLDREPVEAG*