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SCNpilot_cont_500_bf_scaffold_20381_4

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(2184..2489)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F6364D similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 101.0
  • Bit_score: 198
  • Evalue 4.20e-48
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 101.0
  • Bit_score: 196
  • Evalue 2.30e-47
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 99.0
  • Bit_score: 190
  • Evalue 2.80e-46

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGATCAAATCCGAACTCGTTCAGCGCATCGCCGAGCATAACCCGCACCTGTATCAGCGGGATGTCGAGAACATCGTGAACGCTATTCTCGATGAAATCGTTGCGGCCCTGGCACGCGGCGATCGCGTCGAATTGCGGGGTTTTGGCGCTTTTTCAGTCAAGCACCGTCCGGCGCGCGCGGGCCGCAATCCGCGCACCGGCGAGCATGTTCCGGTCGAGCAGAAGAGCGTGCCGTTCTTCAAGACCGGCAAGGAAATGCGCGAGCGGCTGAACCGCGACGAGGCGGCTGATCCGGCCGCGACGTAA
PROTEIN sequence
Length: 102
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARAGRNPRTGEHVPVEQKSVPFFKTGKEMRERLNRDEAADPAAT*