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SCNpilot_cont_500_bf_scaffold_23872_6

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(3740..4513)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0003619CAB similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 257.0
  • Bit_score: 427
  • Evalue 1.10e-116
Uncharacterized protein {ECO:0000313|EMBL:EKS36223.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 257.0
  • Bit_score: 422
  • Evalue 4.90e-115
low temperature requirement A similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 249.0
  • Bit_score: 361
  • Evalue 2.30e-97

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
CGCATGAACCTGCTACGCATCAGCTGCTGGCTGGCTTGCAGCGGCGTGTTCTGGATCGCGGGCGGCCTGAGCGAGGGGCAGACGCGGCTCTGGCTCTGGATCATTGCGGTGGCGATCGAATATTGCGGGCCGGTCATGCGCTTCCGGTTTCCGGGGCTGGGCGCGACGCCCCTGGGAGACTGGGAGGTCGAGGGCGGCCATATGGCCGAGCGCTGCGCGCTCTTCATCATCATCGCGCTTGGCGAATCCATTGTCGTCACCGGCACGACGTTCGGAGAAGCCGCCTGGACTTCCACCGCGATCATGGCGTTTCTTGTCGCGCTGATCGGCAGTATCGCGATGTGGTGGGTTTATTTCCATCTCGGCGCGGAAGCGGGCGCCGAGCATATCACGCATTCGGATGAGACGGGACGGATCGCAAGGTCAGCCTATACGTACATGCACCTGCCGATCGTCGCCGGAATCGTCGTATCGGCGGTGGGCGATGAAATCCTGCTGGCGCATCCCGACGGCCATTCGGACATCAAGGCCATCATCGGGATCGTCGGCGGCCCGCTGCTGTTCCTGATCGGAACGCTGTTGTTCAAGCGGCTGATGCGCCATCTGTGGCAGCTCTCGCACATGGTCGGCATCGCGCTGCTGCTTGCGATGATCCCGCTGGCGCATCAGCTCGCGCCGCTTCAGCTATCCGCGGCGACGACGGTCATCATGCTGATCGTCGCGGCATGGGAAGCGATCTCACTGGGATCGAAGACGGTGAGCGACGAGGTTTAG
PROTEIN sequence
Length: 258
RMNLLRISCWLACSGVFWIAGGLSEGQTRLWLWIIAVAIEYCGPVMRFRFPGLGATPLGDWEVEGGHMAERCALFIIIALGESIVVTGTTFGEAAWTSTAIMAFLVALIGSIAMWWVYFHLGAEAGAEHITHSDETGRIARSAYTYMHLPIVAGIVVSAVGDEILLAHPDGHSDIKAIIGIVGGPLLFLIGTLLFKRLMRHLWQLSHMVGIALLLAMIPLAHQLAPLQLSAATTVIMLIVAAWEAISLGSKTVSDEV*