ggKbase home page

SCNpilot_cont_500_bf_scaffold_27192_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 731..1429

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 232.0
  • Bit_score: 441
  • Evalue 1.20e-121
Pseudouridine synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZK3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 232.0
  • Bit_score: 442
  • Evalue 2.90e-121
  • rbh
RluA family pseudouridine synthase {ECO:0000313|EMBL:EKS34631.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 232.0
  • Bit_score: 442
  • Evalue 4.10e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGATACGCCACAACTCAGCGCCGACGACATTGTGGCCCGCGTCCTGCATCGCGACGGCCTGATGCTTGTGATCGACAAGCCCGCCGGCCTGCCGGTGCATCGCGGGCCGAAAGGCGGCGCGAATCTGGAAGATTCGTTCGACGCGTTGCGCTTCGGCCTGCCGCGCCCGCCGGTGCTGGCGCATCGGCTCGATCGCGACACCTCCGGTTGTCTGGTACTCGGACGCCACCGCAAGGCCACGGCCTCACTGGGACTGCTGTTCAAGCACGGCAAGATCGACAAGACCTATTGGGCCGTGGTCGAAGGCAGTCCTTCCGAGAACGAAGGCATCATCGACATTCCGCTCGGCCGATTGAATGCCGAACGCGGCTGGTGGCAGAAACCCGATCCCGAGGGGCAACCGGCGCTGACGAACTGGACCGTGCTGGGGCGCGGCGATGGACTGACATGGCTCGCGCTCGAACCGGTCACCGGTCGCACCCATCAATTGCGCGTGCATTGCGCGGCAAGCGGCTGGCCCATCGTCGGCGACAACATCTACGGCAACGGCCCGCGCTTCGGCGAACCGTCGCTGCATCTGCACGCGCGCGAGATCGTAATTCCATTGTCGAAGAACAAACCGCCAGTGCGCGTCGTCGCCCCCGCGCCGCCGCATCTCCATGAACGGCTCAAGGCGTGCGGGTGGAACGGGGAGTAG
PROTEIN sequence
Length: 233
MDTPQLSADDIVARVLHRDGLMLVIDKPAGLPVHRGPKGGANLEDSFDALRFGLPRPPVLAHRLDRDTSGCLVLGRHRKATASLGLLFKHGKIDKTYWAVVEGSPSENEGIIDIPLGRLNAERGWWQKPDPEGQPALTNWTVLGRGDGLTWLALEPVTGRTHQLRVHCAASGWPIVGDNIYGNGPRFGEPSLHLHAREIVIPLSKNKPPVRVVAPAPPHLHERLKACGWNGE*