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SCNpilot_cont_500_bf_scaffold_29039_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(531..893)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NN76_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 103.0
  • Bit_score: 132
  • Evalue 2.60e-28
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS31772.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 103.0
  • Bit_score: 132
  • Evalue 3.60e-28
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 103.0
  • Bit_score: 123
  • Evalue 4.90e-26

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGCGTACTATAGAAGCAAGCTCGTCCGGGCCGGACGTTCGGCAAGCGAAGCTGAGGCGCTTCAAGCTCATCGACTACCTGCGGCGGACCAGGAAATCCGTCAAGAACCTACCGATCGACGCCGCGGAGAACGTGACGGCCGGCGACGATCCGTCGGCGGTCGAGAGCAGCCTGGATCTGGGGCAGATCTTGGGACTGCTGCCCGAAAAGATGCGCTGCTCGATCGTCGCGGTGAAACTCGACGGCCGCAGCGTCTCCGAGGCCGCCGAACGGTGCGGCATCTCGGAGCCGTTGGTGAAGATCAATATCCACCGCGGCCTGAAGCGCCTGGCCGCCCTGATCGCGAAGGAGACGCGCGCGTGA
PROTEIN sequence
Length: 121
VRTIEASSSGPDVRQAKLRRFKLIDYLRRTRKSVKNLPIDAAENVTAGDDPSAVESSLDLGQILGLLPEKMRCSIVAVKLDGRSVSEAAERCGISEPLVKINIHRGLKRLAALIAKETRA*