ggKbase home page

SCNpilot_cont_500_bf_scaffold_30792_4

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(1114..2265)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00037EBBC0 similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 236.0
  • Bit_score: 408
  • Evalue 7.80e-111
NnrS family protein {ECO:0000313|EMBL:EFI52435.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 407
  • Evalue 1.90e-110
NnrS; K07234 uncharacterized protein involved in response to NO similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 241.0
  • Bit_score: 347
  • Evalue 3.90e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGACTACTCAACATACGCCGGTGCCGCGTTTGCGATCCTATCAGGGGCCAGCAGTGCTGTCGTGTGGGTTCAGGCCGTTTTTCCTGCTTGGCGCGGTCTATGCCGGGCTGGCGATTCTGGTGTGGTTGCCGGTGTTTCTCGGTGAATTGATGCTGACCACGGCGTTTGCGCCGCGCGACTGGCACATCCACGAAATGCTTTACGGCTACCTGCCTGCGGTGATCACCGGATTCCTGTTCACGGCGATTCCGAACTGGACCGGACGGTTGCCCCTTCAGGGCACGCCGTTGCTTGTGCTGGTGATTATCTGGATTCTCGGCCGCTTCGCCGTGACATGTTCAGCACAGATCGGCTGGCTGGCGGCCATGGCGATCGACGTTGCCTTTCTGGCTTTGATTACGGCTGCGGCTGCGCGTGAAATCCTTGCTGGAAGCAACTGGCGGAACCTCAAGGTCGTTGCCCTGGTCGCGTTTCTTCTGGTCGGCAATATCGCCTTTCATCTCGAAGCACACTTTAAGGGTACCGCAGATTACGGCATTCGCGCGGGCATTGCGATTGTTGTCATGTTGATCGTGTTGATCGGGGGCCGGATCATTCCAAGTTTCACGCGGAACTGGCTTGCCCGTGAGAAGCCCGGGCGGCTGCCGTCGCCTTTCGCCGGTTTTGATGTCGCTGTCGTTGCCGCGAGCGCGGTGGCGCTACTCGCGTGGATTTTCTGGCAAGATGGTCCTGTGATCGACTTTCGACGAGCGGCTCGTCCTGATTCTGCATGTTGGATATGCCTTCGTTCCTTTTGGTTTTCTGCTGGTTGCCGCATCTGCCTTCAATCTCGTTCCCGCAAGCGCCGGTCTTCACGCGTGGATGGCGGGTGCTGCCGGAGTAATGACGTTAGCCGTGATGACGCGGGCAAGCCTCGGCCATACCAACCGGCCGTTGACCGCTTCGCTATCAACACAGGGAATTTACGTTGCTGTTGTGGTTGCCGCGCTTGCCCGTATCTGCGCCGTCATCTCGCCGGACTGGAGCGGCCAGCTCCTGCATGTCGCAAGCTTCGCATGGGCCCTGGCATTTCTTGGCTTTGCGGCTTGTTTCGGTCCGGCGCTTCTAACCGAGGCGAAACGCCGATAGCGCCTGCGGTGCTATCTCGGTAA
PROTEIN sequence
Length: 384
MTTQHTPVPRLRSYQGPAVLSCGFRPFFLLGAVYAGLAILVWLPVFLGELMLTTAFAPRDWHIHEMLYGYLPAVITGFLFTAIPNWTGRLPLQGTPLLVLVIIWILGRFAVTCSAQIGWLAAMAIDVAFLALITAAAAREILAGSNWRNLKVVALVAFLLVGNIAFHLEAHFKGTADYGIRAGIAIVVMLIVLIGGRIIPSFTRNWLAREKPGRLPSPFAGFDVAVVAASAVALLAWIFWQDGPVIDFRRAARPDSACWICLRSFWFSAGCRICLQSRSRKRRSSRVDGGCCRSNDVSRDDAGKPRPYQPAVDRFAINTGNLRCCCGCRACPYLRRHLAGLERPAPACRKLRMGPGISWLCGLFRSGASNRGETPIAPAVLSR*