ggKbase home page

SCNpilot_cont_500_bf_scaffold_35780_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 782..2506

Top 3 Functional Annotations

Value Algorithm Source
heme ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI00030085D7 similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 343.0
  • Bit_score: 350
  • Evalue 3.80e-93
Uncharacterized protein {ECO:0000313|EMBL:EKS42597.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 314.0
  • Bit_score: 345
  • Evalue 1.70e-91
transport system permease; K02015 iron complex transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 306.0
  • Bit_score: 336
  • Evalue 1.80e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1725
GTGACCTCCGATACCCTGTCGACGGGTCACGAAGCGGAGTCCGTCCGACCCCAACGCTCCGCTACCGATCGTGCGCGCCTGTTCGTGCTGGCGTCGCTCGCCGCCGCGCTCGTCCTTGCGGTGCTTGTCGCCGTGGGCGTCGGCGCCGCGGGCATTCCGCCGCACCGCCTGTTCGCCGCCGCCGGCCTGTGGGAGGGTGACGCGACCCTGATTGCGCGCGACCGCCTGATCCTCGGCTCGGTCCGCCTGCCGCGCATCGCGATGGCGGTGATCATCGGCGGAATGCTCGGTGTGTCGGGCGCCATCATGCAGGGGTTGTTCCGCAATCCGCTTGCCGATCCCGGACTGGTCGGCGTGTCGGCCGGAGGCGCGCTGGCGGCCGCGACCGCCATCGTCATCGGCGACACCGTGGCGGCACGGTACGGCGTCGCGCTGCCGTTCGGTCTCCTGCCATGCGCCGCATTCGTCGGCGCGTTGATCACCACCGCGATCCTCTACCGCATCGCGACGCGCGAGGGGCGCACGACGATCGCGGTGTTCCTGCTCGCCGGGCTGGCGATCGGCGCCCTCGCGATGGCGGGCATCGGCCTTCTGGTGTTCGTCGCGGACGACCGCCAGTTGCGCGACATCCAGTTCTGGATGCTCGGCTCGCTCGGCGGCGCGACATGGGACAAAGCCGCGGTGCTGCTGCCCATCATGCTTTTCGTCGCCGCGGCTATGCCGTTCGTCGCGCGCGGGCTCGACCGGCTGGTGCTCGGCGAGAACGAGGCGTTCCACATGGGCATTCGCGTGCAGCAGCTGAAACGCTGGTGCATCGTGCTTGTCGCCGCCGCCGTGGGGTCGGCGGTCGCGTTTGCGGGAGTGATCGGCTTCGTCGGAATCATCGTTCCGCACCTGCTGCGCCTCGTGCTCGGGCCGGGTCACCGGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGCGCTGTTGCTGCGCCATCGCGTGCTGATGCCATGAGTGACATTCTCGAAGCGCGTGACGTGGCGTTTGTGATCGGCGGAAAAAAGATCCTCGATGGCGTGTCGCTGTGCGTGCGTGGCGGCGAATCGGTCGCGCTGGTGGGGCCTAACGGCGCCGGAAAGTCGACGCTGCTGCGCCTCCTCTCGGGCGATCTCCGCGCTTCGCGCGGGGCCGTGATGCTCAAGGGCCGGCCGATCGCAAGCTATGCGCCGGCCGCGCTCGCGCATCACCGCGCCGTGCAGTCACAGAGCGTGGCGGTGGCGTTTCCGTTCACGGTCGCCGAGATCGTCGCGATGGGGGCCGGCGACGCGCGCGGCCGCGACGTGGCGGCGCTGGTCGATCGCGCGCTCGCGGCGGTCGATCTCGCGGGCTTTGCGGACCGCGTCATCACAACGCTTTCGGGCGGCGAACAGCAGCGCGCGCATTTTGCCCGGGTCCTCGTGCAGAACGCCTATGGCGAGGCGCATGACGCGCCCGGCGTTCTGTTGCTCGACGAGCCGACCGCGAGTCTCGACCTCAGGCATCAGCTCACGGTCGCGAAGGCCGTGCGCCGGCGCGTCGCGGAAGGAAGCGCGGTCGTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCGAGCGCGTCTTCGGCGTGGGAGATTGCGTTCGCGTGTGGCCCGGCATGACCGTGCCGGTCGTCCTGCCGCGCTTCACCGTGGCCTGA
PROTEIN sequence
Length: 575
VTSDTLSTGHEAESVRPQRSATDRARLFVLASLAAALVLAVLVAVGVGAAGIPPHRLFAAAGLWEGDATLIARDRLILGSVRLPRIAMAVIIGGMLGVSGAIMQGLFRNPLADPGLVGVSAGGALAAATAIVIGDTVAARYGVALPFGLLPCAAFVGALITTAILYRIATREGRTTIAVFLLAGLAIGALAMAGIGLLVFVADDRQLRDIQFWMLGSLGGATWDKAAVLLPIMLFVAAAMPFVARGLDRLVLGENEAFHMGIRVQQLKRWCIVLVAAAVGSAVAFAGVIGFVGIIVPHLLRLVLGPGHRLXXXXXXXXXXXXPRAVAAPSRADAMSDILEARDVAFVIGGKKILDGVSLCVRGGESVALVGPNGAGKSTLLRLLSGDLRASRGAVMLKGRPIASYAPAALAHHRAVQSQSVAVAFPFTVAEIVAMGAGDARGRDVAALVDRALAAVDLAGFADRVITTLSGGEQQRAHFARVLVQNAYGEAHDAPGVLLLDEPTASLDLRHQLTVAKAVRRRVAEGSAVVXXXXXXXXXXXXXXXVERVFGVGDCVRVWPGMTVPVVLPRFTVA*