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SCNpilot_cont_500_bf_scaffold_33298_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 175..789

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D2D284 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 195.0
  • Bit_score: 259
  • Evalue 4.10e-66
Polysaccharide export protein {ECO:0000313|EMBL:ETR76716.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 203.0
  • Bit_score: 253
  • Evalue 1.80e-64
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 179.0
  • Bit_score: 242
  • Evalue 9.50e-62

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGCGCCAATCAATCTTGACCAACTCGATGTGAGCGACATGCTGCAACGATACATTCTCTTGCTGGTCTGTGGTGTCCTTGCGTACGCAGGCACAGTAGCGCTCGATGCATCAAACGCGCTTTCAGCCGAACGTGCGGCGCATGCATCGTCATCATCGACGTATATCCTTGGTCCAAACGACAGAATTCGAGTCAAGGTCTATGGCGAGCAGGACATTACTGGCGAGTATGAAATCGACAGCGCCGGGAGCGTTTCAATCCCACTAGCAGGACATGTAAAAGCCGCGGGACTTACAACACGACAGGTCGAACGCGGCATCGCAGCCGCACTATCCAAGGGGATCGTTCGCGATCCGCGCGTCAATGTCGAGGTTGCCGCTTATCGGCCATATTACATTCTTGGAGAAGTCAAGAAGAGCGGCGAGTATCCCTATCGAAACGGTTTGACCGTGTTGGACGCAGTCGCGAGCGCGGGTGGCTTCACCTATCGTGCGAATGAGGGCAAAGTATATCTTCGCCGATCAGGAAGCACGACGGAGGAAGCATATCCGTTGACCGCCCCGGTTCCCGTCTACCCGGGTGACAACATCCGAATCCCTGAGCGTTACTTCTAA
PROTEIN sequence
Length: 205
MAPINLDQLDVSDMLQRYILLLVCGVLAYAGTVALDASNALSAERAAHASSSSTYILGPNDRIRVKVYGEQDITGEYEIDSAGSVSIPLAGHVKAAGLTTRQVERGIAAALSKGIVRDPRVNVEVAAYRPYYILGEVKKSGEYPYRNGLTVLDAVASAGGFTYRANEGKVYLRRSGSTTEEAYPLTAPVPVYPGDNIRIPERYF*