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SCNpilot_cont_500_bf_scaffold_62576_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(3..1076)

Top 3 Functional Annotations

Value Algorithm Source
Strongly similar to RND multidrug efflux transporter MexF n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZQ7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 335.0
  • Bit_score: 395
  • Evalue 4.90e-107
Transporter {ECO:0000313|EMBL:ETR78589.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 328.0
  • Bit_score: 404
  • Evalue 1.10e-109
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 328.0
  • Bit_score: 388
  • Evalue 2.40e-105

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
AACGTGGAGCGCCGATTGCGAGAGGGCCTCTCGCCCATGGAGGCCGCGCGCGCCACCATGGACGAGGTCGGCGCCGCCCTGATCGCCATCGCCCTCGTGCTCGTCGCCGTGTTCGTGCCATCGGCCTTCGTCGGCGGCATTGCCTACATGGGGCTGCCGGTCACCCAGTTCCCCGAGATCTCCCCACCGACGATCACCGTGTCCGCCACCTATCCCGGTGCCGGCGCCCAGACCGTCGCCGATACCGTCGCTGCCGTGATCGAGCAGGAGATCAACGGCGTCGACGGGATGATCTACATGTACTCCCAGTCGACGCAGCAAGGCACGATGTCGATCACCGTGACCTTCGACGTCGGCTACGACATCGACAAGGCGCAGGTGCTCGTGCAGAACCGCGTCGCTGCGGCCGAGCCGCGCCTGCCTGAGGAAGTGCGCCGATCCGGCGTGCAGGTGCGCAAGAACTCGCCCGACCTCCTGCTCGTCGTGCACATGGTGTCGCCCGACAGCACATACGATCAGGTCTACATCTCGAACTACGCCCTCCTGAACGTGCGTGACGTACTCGCCCGCATTCCAGGCGTCGGCGAGGTGAACGCGTTCGGCGCGCGCGAATACTCCATGCGCGTCTGGCTCGATCCTGAACGGATCGCGGCGCTGAACCTCACCGCTGAGGAGATCCTGGGCGCGCTACGTCAGCAGAACGTCCAGGTCGCGGGCGGCTCCATCGGCGAGCCGCCGATGCCCAATCAGGGCGCCTTCGAGCAGTCGCTGCAGCTTCGCGGTCGCCTTCTCGATGCGCGCGAGTTCGAGGAGATCGTCATCAAGACCGGCGCCGACGGGCGCACGGTGAAGCTCAAGGATGCCGCGCGCGTCGAGCTCGGCGCCATCTCCTACAACACGTATGGCTACATGGACCGCGTCCCGGCGACCGTGCTCGCCGTGACCCAGGCGCCCGGCAGTGACGCGTTGAAGACGGCGAGCGTGGTCAAGGACACCATGGCCCAGATCGCGCCGAATTTCCCGAAGGGCCTCGAGTATCGGATCATCTACAATCCGACCGAGTTCATCGAGGTC
PROTEIN sequence
Length: 358
NVERRLREGLSPMEAARATMDEVGAALIAIALVLVAVFVPSAFVGGIAYMGLPVTQFPEISPPTITVSATYPGAGAQTVADTVAAVIEQEINGVDGMIYMYSQSTQQGTMSITVTFDVGYDIDKAQVLVQNRVAAAEPRLPEEVRRSGVQVRKNSPDLLLVVHMVSPDSTYDQVYISNYALLNVRDVLARIPGVGEVNAFGAREYSMRVWLDPERIAALNLTAEEILGALRQQNVQVAGGSIGEPPMPNQGAFEQSLQLRGRLLDAREFEEIVIKTGADGRTVKLKDAARVELGAISYNTYGYMDRVPATVLAVTQAPGSDALKTASVVKDTMAQIAPNFPKGLEYRIIYNPTEFIEV