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SCNpilot_cont_500_bf_scaffold_82480_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 134..874

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHE9_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 419
  • Evalue 2.20e-114
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS27879.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 419
  • Evalue 3.00e-114
pleD; response regulator PleD; K02488 two-component system, cell cycle response regulator similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 215.0
  • Bit_score: 385
  • Evalue 1.40e-104

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGTCCGCACGGGTTCTTGTCGTCGACGACGTGCCGGCAAACGTCAAACTGCTGGAAGCGCGGCTGTCGGCGGAATATTTTGACGTGGTCACCGCCAATTGCGGCGCGCAGGCGCTGGAGATTTGTCAGCGCGCGGAATGCGACATCATCCTGCTCGACGTGATGATGCCCGACATCGACGGTTTCGAGGTATGCCGGCGGCTGAAATCCGACCCGCGCACGCACTTCATCCCGGTGGTGATGGTGACCGCGCTCGACAGTCCGTCGGATCGCGTGCGCGGCCTCGACGCGGGCGCCGACGATTTTCTCACAAAACCGGTCTCGGACGTGGTGTTGATCGCCCGCGTGCGCTCGCTGACGCGGCTGAAGATGATGACCGATGAGCTGCGCATGCGCGCCATCACCTCGCACGAAATCGGCCTGCAGGCGCCCGAGCGGGAAGCCGTGGCCGATACCGGCAAGGGCGGTAGGATTCTTCTGGTGGACGATCGCCCGTCATCCTACGAGCGGCTCGCGCCGGTGCTCGCCGAGGAGCATGCCGTCGATGTTGAGCCCAATCCTTCGGAAGCTTTATTCCACGCGGCGGAGAACAATTACGATCTGCTGATCGTTTCGCTCAATCTCGAAGATTACGATGGTCGGCGTGAACGATTATCTGCTCCGCCCGGTGGACAAGAACGAATTGCTGGCGCGGGCGCGCACCCAGATCCGCCGCCATCGCTACACGCACTATCTGCGTGA
PROTEIN sequence
Length: 247
MSARVLVVDDVPANVKLLEARLSAEYFDVVTANCGAQALEICQRAECDIILLDVMMPDIDGFEVCRRLKSDPRTHFIPVVMVTALDSPSDRVRGLDAGADDFLTKPVSDVVLIARVRSLTRLKMMTDELRMRAITSHEIGLQAPEREAVADTGKGGRILLVDDRPSSYERLAPVLAEEHAVDVEPNPSEALFHAAENNYDLLIVSLNLEDYDGRRERLSAPPGGQERIAGAGAHPDPPPSLHALSA*