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SCNpilot_cont_500_bf_scaffold_76010_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(816..1412)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07UL0_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 196.0
  • Bit_score: 331
  • Evalue 4.80e-88
RNA-binding S1 domain-containing protein; K06959 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 196.0
  • Bit_score: 331
  • Evalue 1.50e-88
RNA binding S1 domain protein {ECO:0000313|EMBL:ABJ04374.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 196.0
  • Bit_score: 331
  • Evalue 6.70e-88

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GATTATCGCACCGGCGTCAAGGTCGCGGTGGTGGATGCCACCGGCAAGGTGGTGGCGACGACCGCGATCTTCCCGCACGAGCCGCAGCGGCGTTGGGACGAGGCGTTGGCAATCCTCGGCAAGCTGGCGAAAGCGCATAATGTCGAACTGATCGCCATCGGCAACGGCACGGCCTCGCGCGAGACCGACAAACTCGCCACCGAACTTCTGAAGCTGTTGCCCGACCTGAAGATGTCCAAGATCGTGGTGTCGGAAGCCGGCGCATCGGTCTATTCGGCGTCGGCCTTTGCGTCCGAGGAGTTGCCTGAACTCGACGTCACGTTGCGCGGCGCTGTGTCGATCGCGCGGCGCTTGCAGGACCCGCTGGCCGAACTGGTGAAGATCGATCCGAAGTCGATTGGCGTCGGGCAGTATCAGCACGATCTCGGCGAAGCGAAGCTGTCGCGCTCGCTCGATGCGGTGGTGGAAGACTGCGTCAACGCGGTCGGCGTCGATGCCAACACGGCTTCCGCGCCGCTGCTCGCGCGCGTCTGTGCCGCGTCTCGGGCCGAAGGCGTTCGAGCAATGCGCGGGATTCCTGCGCATCGCGAACGGTGA
PROTEIN sequence
Length: 199
DYRTGVKVAVVDATGKVVATTAIFPHEPQRRWDEALAILGKLAKAHNVELIAIGNGTASRETDKLATELLKLLPDLKMSKIVVSEAGASVYSASAFASEELPELDVTLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDLGEAKLSRSLDAVVEDCVNAVGVDANTASAPLLARVCAASRAEGVRAMRGIPAHRER*