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SCNpilot_cont_500_bf_scaffold_235

Search features with annotation key words

Displaying items 121-150 of 335 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_235_120
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130170..131159)
DNA (990bp) protein (330aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003789FB4
oxidoreductase-like rbh
Oxidoreductase-like protein {ECO:0000313|EMBL:ABG62078.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_235_121
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131415..132212)
DNA (798bp) protein (266aa)
Putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C7B5_9RHIZ rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EJM99953.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_235_122
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132316..132897)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E360F
Uncharacterized protein {ECO:0000313|EMBL:CDX19280.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_123
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132980..133549)
DNA (570bp) protein (190aa)
UPI0003CEED28 related cluster n=1 Tax=unknown RepID=UPI0003CEED28
Cytochrome B {ECO:0000313|EMBL:ESY83747.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
cytochrome B561
SCNpilot_cont_500_bf_scaffold_235_124
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133611..134453)
DNA (843bp) protein (281aa)
UPI0003CF9AC8 related cluster n=1 Tax=unknown RepID=UPI0003CF9AC8
Putative oxidoreductase {ECO:0000313|EMBL:CDX41683.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
aldo/keto reductase
SCNpilot_cont_500_bf_scaffold_235_125
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134460..136865)
DNA (2406bp) protein (802aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBC6_MESCW
SCNpilot_cont_500_bf_scaffold_235_126
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136862..137287)
DNA (426bp) protein (142aa)
UPI0003D026ED related cluster n=1 Tax=unknown RepID=UPI0003D026ED
Aldehyde-activating protein {ECO:0000313|EMBL:ESZ22604.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_127
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137284..137637)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VHL3_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:KJS19030.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_128
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137582..137869)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z2H1_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KFI25510.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_129
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(137909..138994)
DNA (1086bp) protein (362aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPC1_9RHIZ
SCNpilot_cont_500_bf_scaffold_235_130
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139034..140092)
DNA (1059bp) protein (353aa)
Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3L5_POLGS rbh
Ring-hydroxylating dioxygenase, large terminal subunit rbh
Ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:ADZ72151.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_235_131
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(140231..140632)
DNA (402bp) protein (134aa)
50S ribosomal protein L20 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E5D0F
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_235_132
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(140729..140938)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037E92D5
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ribosomal protein L35
SCNpilot_cont_500_bf_scaffold_235_133
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141121..141744)
DNA (624bp) protein (208aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WX20_OCHA4
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABS13524.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_235_134
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141851..142249)
DNA (399bp) protein (133aa)
Translation initiation factor IF-3 n=1 Tax=Nitratireductor indicus C115 RepID=K2N2Q5_9RHIZ
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
SCNpilot_cont_500_bf_scaffold_235_135
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142529..143302
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KK5_MESSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG62070.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_235_136
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143305..144447
DNA (1143bp) protein (381aa)
Benzoate transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y759_9RHIZ
Benzoate transporter {ECO:0000313|EMBL:EHH12361.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
benzoate transporter; K05782 benzoate membrane transport protein
SCNpilot_cont_500_bf_scaffold_235_137
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144566..145009
DNA (444bp) protein (148aa)
UPI0003CE7967 related cluster n=1 Tax=unknown RepID=UPI0003CE7967
Uncharacterized protein {ECO:0000313|EMBL:CDX21124.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Protein of unknown function (DUF2852)
SCNpilot_cont_500_bf_scaffold_235_138
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145106..145849
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKS6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58774.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K07043
SCNpilot_cont_500_bf_scaffold_235_139
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146066..146719
DNA (654bp) protein (218aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y763_9RHIZ
phosphoribosylanthranilate isomerase
SCNpilot_cont_500_bf_scaffold_235_140
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146820..148040
DNA (1221bp) protein (407aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Tryptophan synthase beta chain n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKS9_9RHIZ rbh
tryptophan synthase, beta subunit
SCNpilot_cont_500_bf_scaffold_235_141
unknown

Not on your lists

148110..148217
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_235_142
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148214..149056
DNA (843bp) protein (281aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20]
UPI0003D0357D related cluster n=1 Tax=unknown RepID=UPI0003D0357D rbh
SCNpilot_cont_500_bf_scaffold_235_143
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149093..150034
DNA (942bp) protein (314aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKT1_9RHIZ
acetyl-CoA carboxylase, carboxyl transferase, beta subunit
SCNpilot_cont_500_bf_scaffold_235_144
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150076..151407
DNA (1332bp) protein (444aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
UPI0003CEE406 related cluster n=1 Tax=unknown RepID=UPI0003CEE406
Folylpolyglutamate synthase {ECO:0000313|EMBL:ESW83662.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_500_bf_scaffold_235_145
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151800..152123)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LMG8_9RHIZ
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
thioredoxin; K03671 thioredoxin 1
SCNpilot_cont_500_bf_scaffold_235_146
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152193..155714)
DNA (3522bp) protein (1174aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CEEF5A related cluster n=1 Tax=unknown RepID=UPI0003CEEF5A
double-strand break repair helicase AddA
SCNpilot_cont_500_bf_scaffold_235_147
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155778..158756)
DNA (2979bp) protein (993aa)
LuxR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000369A327
Double-strand break repair protein AddB {ECO:0000313|EMBL:ADV09631.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
double-strand break repair protein AddB
SCNpilot_cont_500_bf_scaffold_235_148
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158753..159493)
DNA (741bp) protein (247aa)
UPI0003CEF78F related cluster n=1 Tax=unknown RepID=UPI0003CEF78F rbh
Nucleotidyl transferase {ECO:0000313|EMBL:CDX53444.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Nucleoside-diphosphate-sugar pyrophosphorylase family protein rbh
SCNpilot_cont_500_bf_scaffold_235_149
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159490..160998)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N3Z6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18988.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein; K06925 UPF0079 ATP-binding protein; K07102
Displaying items 121-150 of 335 in total

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