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SCNpilot_cont_500_bf_scaffold_235

Search features with annotation key words

Displaying items 211-240 of 335 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_235_210
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227832..228578)
DNA (747bp) protein (249aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4G3_MAGSA rbh
ABC-type branched-chain amino acid transport systems, ATPase component; K01995 branched-chain amino acid transport system ATP-binding protein rbh
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:BAE51262.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_cont_500_bf_scaffold_235_211
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228575..229573)
DNA (999bp) protein (333aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P084_AZOS1
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:EWY39758.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
livM; branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_235_212
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229570..230442)
DNA (873bp) protein (291aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P083_AZOS1
livH; branched-chain amino acid transport system permease protein; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_500_bf_scaffold_235_213
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230511..231047)
DNA (537bp) protein (179aa)
ABC-type branched-chain amino acid transport systems n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5P1_MAGSA
ABC-type branched-chain amino acid transport systems; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_235_214
unknown

Not on your lists

231142..231717
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_235_215
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231918..232718)
DNA (801bp) protein (267aa)
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4U4_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHH13179.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_235_216
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232720..233361)
DNA (642bp) protein (214aa)
UPI0003D06D3E related cluster n=1 Tax=unknown RepID=UPI0003D06D3E
Uncharacterized protein {ECO:0000313|EMBL:ESZ22220.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
OstA family protein; K09774 lipopolysaccharide export system protein LptA
SCNpilot_cont_500_bf_scaffold_235_217
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233348..234085)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIY6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59281.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K11719 lipopolysaccharide export system protein LptC
SCNpilot_cont_500_bf_scaffold_235_218
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234344..235285
DNA (942bp) protein (314aa)
Clp protease n=1 Tax=Rhizobium loti RepID=UPI00037BFAA9 rbh
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:AID32501.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
signal peptide peptidase SppA, 36K type rbh
SCNpilot_cont_500_bf_scaffold_235_219
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235368..235649
DNA (282bp) protein (94aa)
Integration host factor subunit beta n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C116_9RHIZ
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
integration host factor subunit beta; K05788 integration host factor subunit beta
SCNpilot_cont_500_bf_scaffold_235_220
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235792..236124
DNA (333bp) protein (111aa)
UPI0003CEEB9B related cluster n=1 Tax=unknown RepID=UPI0003CEEB9B
Uncharacterized protein {ECO:0000313|EMBL:ESY77788.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_221
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236142..237116
DNA (975bp) protein (325aa)
Ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
UPI0003D04DCF related cluster n=1 Tax=unknown RepID=UPI0003D04DCF rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX32591.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_235_222
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237154..237639
DNA (486bp) protein (162aa)
UPI0003CE52F6 related cluster n=1 Tax=unknown RepID=UPI0003CE52F6
Uncharacterized protein {ECO:0000313|EMBL:ESW89886.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_223
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237676..238053)
DNA (378bp) protein (126aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J0A8_PSEUL
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:BAK78407.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_cont_500_bf_scaffold_235_224
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238121..238807)
DNA (687bp) protein (229aa)
UPI0003CF2CCA related cluster n=1 Tax=unknown RepID=UPI0003CF2CCA
DNA-binding protein {ECO:0000313|EMBL:ESY71184.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative transcriptional regulator (winged helix domain)
SCNpilot_cont_500_bf_scaffold_235_225
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238939..239958
DNA (1020bp) protein (340aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
UPI0003CFB2D9 related cluster n=1 Tax=unknown RepID=UPI0003CFB2D9
SAM dependent methyltransferase {ECO:0000313|EMBL:CDX24062.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_cont_500_bf_scaffold_235_226
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239960..240820
DNA (861bp) protein (287aa)
tRNA/rRNA methyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIZ3_9RHIZ
RNA methyltransferase {ECO:0000313|EMBL:EXL09659.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
rRNA methylase
SCNpilot_cont_500_bf_scaffold_235_227
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240817..241323
DNA (507bp) protein (169aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
UPI0003CE8CA3 related cluster n=1 Tax=unknown RepID=UPI0003CE8CA3
SCNpilot_cont_500_bf_scaffold_235_228
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241368..242360
DNA (993bp) protein (331aa)
Dehydrogenase (Zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIZ5_9RHIZ
Dehydrogenase (Zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) {ECO:0000313|EMBL:EHK59290.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
YhdH/YhfP family quinone oxidoreductase
SCNpilot_cont_500_bf_scaffold_235_229
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242436..244727
DNA (2292bp) protein (764aa)
Two-component sensor/response regulator hybrid n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIZ7_9RHIZ
Two-component sensor/response regulator hybrid {ECO:0000313|EMBL:EHK59292.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PAS/PAC sensor hybrid histidine kinase
SCNpilot_cont_500_bf_scaffold_235_230
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244842..245726
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCP0_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10882.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_235_231
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245848..246519
DNA (672bp) protein (224aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ79_METNO rbh
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACL58579.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_235_232
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246536..247186
DNA (651bp) protein (217aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ80_METNO
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACL58580.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_235_233
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247226..248041
DNA (816bp) protein (272aa)
Extracellular solute-binding protein family 3 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ81_METNO
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACL58581.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_235_234
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248090..250384)
DNA (2295bp) protein (765aa)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:EHK58732.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EHK58732.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
malic enzyme n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031F0E54
malic enzyme
SCNpilot_cont_500_bf_scaffold_235_235
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250442..253294
DNA (2853bp) protein (951aa)
UPI0003CE0B25 related cluster n=1 Tax=unknown RepID=UPI0003CE0B25 rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
DNA mismatch repair protein MutS rbh
SCNpilot_cont_500_bf_scaffold_235_236
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253350..253664
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Cronobacter RepID=K8C0L0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KGM30996.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_237
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253528..255426)
DNA (1899bp) protein (633aa)
Mll5209 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CC4_RHILO
hypothetical protein
Mll5209 protein {ECO:0000313|EMBL:BAB51697.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_235_238
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255651..258440
DNA (2790bp) protein (930aa)
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
Protein-PII uridylyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPR8_9RHIZ
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_235_239
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258496..260076
DNA (1581bp) protein (527aa)
multidrug transporter MurJ n=1 Tax=Hoeflea sp. 108 RepID=UPI0003671A02
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
integral membrane protein MviN; K03980 virulence factor
Displaying items 211-240 of 335 in total

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