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SCNpilot_cont_500_bf_scaffold_244

Search features with annotation key words

Displaying items 151-180 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_244_148
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147269..147436)
DNA (168bp) protein (56aa)
Putative uncharacterized protein id=2763982 bin=GWF1_Flavobacteria_32_7 species=Prevotella buccae genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Sel1
Tax=GWF1_Flavobacteria_32_7_curated
SCNpilot_cont_500_bf_scaffold_244_149
Paracoccus haeundaensis, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147601..149061)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Paracoccus haeundaensis RepID=I2ECC1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ97318.1}; TaxID=225362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus haeundaensis.;"
DGQHR domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_244_trna_3
unknown

Not on your lists

comp(149753..149824)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_244_150
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150058..150555
DNA (498bp) protein (166aa)
DNA-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F3BF8C
DNA-binding protein {ECO:0000313|EMBL:EZQ14675.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
YbaK/prolyl-tRNA synthetase associated protein
SCNpilot_cont_500_bf_scaffold_244_151
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150644..151651
DNA (1008bp) protein (336aa)
Thioredoxin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL00_9RHIZ
Thioredoxin {ECO:0000313|EMBL:EXL03375.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
thioredoxin; K05838 putative thioredoxin
SCNpilot_cont_500_bf_scaffold_244_152
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151749..152420
DNA (672bp) protein (224aa)
ATP-dependent protease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHF9_9RHIZ
ATP-dependent protease {ECO:0000313|EMBL:ESX70650.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
peptidase S16 lon domain-containing protein; K07157
SCNpilot_cont_500_bf_scaffold_244_153
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152453..152710
DNA (258bp) protein (86aa)
UPF0434 protein Mesau_00967 n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGE4_MESAW
UPF0434 protein MPLB_740007 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_244_154
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152725..155256)
DNA (2532bp) protein (844aa)
UPI0003CF6F80 related cluster n=1 Tax=unknown RepID=UPI0003CF6F80 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:ESY30540.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_244_155
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155328..156041)
DNA (714bp) protein (238aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KEM2_MESAW
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component {ECO:0000313|EMBL:AGB43466.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_244_156
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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156068..156745
DNA (678bp) protein (226aa)
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 {ECO:0000313|EMBL:CDX52561.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CDX52561.1};; EC=3.1.2.- {ECO:0000313|EMBL:CDX52561.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
G-D-S-L family lipolytic protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB40_9RHIZ
lysophospholipase L1-like esterase
SCNpilot_cont_500_bf_scaffold_244_157
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156893..157486
DNA (594bp) protein (198aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter permease; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2'-5' RNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL26_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_244_158
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157550..157852
DNA (303bp) protein (101aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional coactivator/pterin dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIC2_9RHIZ
SCNpilot_cont_500_bf_scaffold_244_159
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157890..158261
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQG6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM71818.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_244_160
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158521..159027
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL29_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58513.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Invasion associated locus B family protein
SCNpilot_cont_500_bf_scaffold_244_161
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159151..160389
DNA (1239bp) protein (413aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] rbh
50S rRNA methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C534F rbh
SCNpilot_cont_500_bf_scaffold_244_162
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160564..162279
DNA (1716bp) protein (572aa)
UPI0003D00FA7 related cluster n=1 Tax=unknown RepID=UPI0003D00FA7
Heparinase II/III family protein {ECO:0000313|EMBL:ESZ69281.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
heparinase II/III family protein
SCNpilot_cont_500_bf_scaffold_244_163
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162367..163983
DNA (1617bp) protein (539aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D8E513
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_244_164
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164043..164720)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VW46_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN04440.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCNpilot_cont_500_bf_scaffold_244_165
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164775..165362)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YDW6_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS48492.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
isoprenylcysteine carboxyl methyltransferase
SCNpilot_cont_500_bf_scaffold_244_166
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165359..166519)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSS1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN04438.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_244_167
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166527..167756)
DNA (1230bp) protein (410aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Argininosuccinate synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL33_9RHIZ rbh
argininosuccinate synthase
SCNpilot_cont_500_bf_scaffold_244_168
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167910..168554
DNA (645bp) protein (215aa)
Lysine exporter protein LysE/YggA n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQG9_9RHIZ rbh
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIM71821.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_500_bf_scaffold_244_169
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168569..169999)
DNA (1431bp) protein (477aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Fmu (Sun) domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TL08_MESCW
Fmu (Sun) domain protein {ECO:0000313|EMBL:ADV10318.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_244_170
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169948..170940)
DNA (993bp) protein (331aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLL6_9RHIZ
SCNpilot_cont_500_bf_scaffold_244_171
Bartonella elizabethae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171067..171291
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bartonella elizabethae RepID=J1JFN1_BAREL
Uncharacterized protein {ECO:0000313|EMBL:EJF96920.1}; TaxID=1094555 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella elizabethae F9251 = ATCC 49927.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_244_172
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171341..171802
DNA (462bp) protein (154aa)
Nuclease (SNase-like) protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLL2_9RHIZ
Nuclease (SNase-like) protein {ECO:0000313|EMBL:EHK58410.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nuclease (SNase-like)
SCNpilot_cont_500_bf_scaffold_244_173
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172071..173537
DNA (1467bp) protein (489aa)
UPI0003CFE9B8 related cluster n=1 Tax=unknown RepID=UPI0003CFE9B8
Uncharacterized protein {ECO:0000313|EMBL:ESZ25541.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_244_174
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173843..174841
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003693AD0
Uncharacterized protein {ECO:0000313|EMBL:GAN77396.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative inner membrane protein; K02351 putative membrane protein
SCNpilot_cont_500_bf_scaffold_244_175
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174795..175256
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YJ20_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN77397.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_244_176
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175473..176474
DNA (1002bp) protein (334aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F6518D
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP71151.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Putative glycine betaine ABC transporter,periplasmic substrate-binding component
Displaying items 151-180 of 197 in total

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