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SCNpilot_cont_500_bf_scaffold_424_59

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(55603..56466)

Top 3 Functional Annotations

Value Algorithm Source
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D6E3_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 287.0
  • Bit_score: 425
  • Evalue 4.60e-116
fixP; cytochrome-c oxidase fixP chain similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 287.0
  • Bit_score: 425
  • Evalue 1.90e-116
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 287.0
  • Bit_score: 425
  • Evalue 6.50e-116

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Taxonomy

Rhizobium lupini → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGCGACAAACAGGTCGACAAGCTGGGCGGCGTCGAAACGACCGGCCATGTGTGGGACGGCATTCGCGAACTCAACAACCCGTTGCCGCGCTGGTGGCTGTGGACCTTCTACGCCACCATCCTCTGGGCGATCGGCTATACGGTCCTCTATCCGGCATGGCCGCTTGTCACGCATGCGACGCGAGGCGTCTTCGGCTTCTCCAGCCGCGCCGATTTGCGGACATCGCTCGACGATGCGACCCGGGCGCAGGCGCGATATGTGGATGCGATCCGCAGCAGGAGCCTGGCCGACATCGAGGCCGATAACGAGCTGAGGCCTTTCGCGATCGCGGCCGGCGCCGCAGCATTCAAGGTCAACTGCTCGCAATGCCATGGCTCCGGCGCCCAGGGCGGCAACGGCTACCCCAATCTCAACGATGACGACTGGCTCTGGGGTGGCGATCTGAGCTCCATCTACCAGACGATCTCGCACGGTATCCGGTACGAGGCCGACGCAGACACCCGTCAGTCCGAGATGCCTGCTTTCCGCGATGTGCTGAAGCCGGATCAGATCAAGGCGGTCGCCTCCTACGTCGTCAGCCTTTCCGGCACGCCGCGGAACCCGGAACTCGCAGTGAAGGGCAAACCGGTGTTCGAACAGAACTGCGCCGCCTGCCATGGACCGGAAGGCAGGGGCGGCCGTCAGGTCGGCGCCCCGAATCTGGCGGACGCCATCTGGCTCTACGGTCCGGGAGAGGAAGCGGTCGAGCGGCAGGTCGAGTCACCGCGCCACGGCGTGATGCCGGCATGGCAGGTGCGGCTTGGCGATACCACCGTCAAGGAACTTACCGTGTTCGTCCACTCCCTCGGCGGGGGAGAGTAG
PROTEIN sequence
Length: 288
MSDKQVDKLGGVETTGHVWDGIRELNNPLPRWWLWTFYATILWAIGYTVLYPAWPLVTHATRGVFGFSSRADLRTSLDDATRAQARYVDAIRSRSLADIEADNELRPFAIAAGAAAFKVNCSQCHGSGAQGGNGYPNLNDDDWLWGGDLSSIYQTISHGIRYEADADTRQSEMPAFRDVLKPDQIKAVASYVVSLSGTPRNPELAVKGKPVFEQNCAACHGPEGRGGRQVGAPNLADAIWLYGPGEEAVERQVESPRHGVMPAWQVRLGDTTVKELTVFVHSLGGGE*