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SCNpilot_cont_500_bf_scaffold_543_1

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(3..716)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Rhizobium meliloti RepID=UPI000305DF0B similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 238.0
  • Bit_score: 362
  • Evalue 4.00e-97
Putative choline uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:CDH83515.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 238.0
  • Bit_score: 362
  • Evalue 5.50e-97
choline uptake ABC transporter substrate-binding protein precursor; K05845 osmoprotectant transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 238.0
  • Bit_score: 360
  • Evalue 4.70e-97

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCCCTACATCAAGATATTTTTCGCTGGCGCGCTGGCGCTTCTGCTCACCGCCGGCGCAGCGCGCGCCGATGTCGTGGTTTCATCCAAGATCGACACCGAGGGTGGTGTGCTCGGCAATATCATCCTCGCTGTGCTGGATGCTCACGACATCCCGACGACGAGTCGTATCCAACTCGGCGGGACGCCCGTCGTGCGCAAGGCAATCCTCGCCGGCCAGGTCGACATCTATCCAGAATACACCGGAAACGCCGCATACTTCTTCAATAAGACGGACGAGCCGATCTGGAAAGATGCCGGGAAGGCCTATGAAGCCGCGAAGAAACTCGATTACGAGAAGAACAAGATCGTCTGGCTGACGCCTGCGCCGGCCAACAACACCTGGGGGATCGCTGTCCGCAAGGACTTCGCCAAGGCAAACAGCCTTGTGACGTTTTCCGACTTCGCCAAATTCATCGACAAGGGCGGCAACGTGAAACTCGCCGCCTCGGCGGAATTCGTGAACTCCGCAGCGGCACTGCCAGCCTTCGAGAAGGCTTACGGCTTCAAGCTGAAGCCCGATCAACTGATCACGCTTTCCGGCGGCGACACGGCAGCGACGATCGCGGCGGCGGCGCGGCAGACCAACGGCGTCAATGCCGCCATGGTTTACGGCACCGACGGCGGCATCGCGCCCTCGGATCTCGTTGTGCTGAAGGACGACAAGAGCGTGCAG
PROTEIN sequence
Length: 238
MPYIKIFFAGALALLLTAGAARADVVVSSKIDTEGGVLGNIILAVLDAHDIPTTSRIQLGGTPVVRKAILAGQVDIYPEYTGNAAYFFNKTDEPIWKDAGKAYEAAKKLDYEKNKIVWLTPAPANNTWGIAVRKDFAKANSLVTFSDFAKFIDKGGNVKLAASAEFVNSAAALPAFEKAYGFKLKPDQLITLSGGDTAATIAAAARQTNGVNAAMVYGTDGGIAPSDLVVLKDDKSVQ