ggKbase home page

SCNpilot_cont_500_bf_scaffold_10759_1

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_67_10

partial RP 27 / 55 BSCG 26 / 51 ASCG 3 / 38
Location: 1..435

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 129.0
  • Bit_score: 178
  • Evalue 1.20e-42
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 129.0
  • Bit_score: 178
  • Evalue 5.30e-42
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003645456 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 143.0
  • Bit_score: 227
  • Evalue 7.10e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
CGCAAGCCGACCGACACGATCCATCCCGCGACGCGCAGCTTCCAGGCGCTGCGCATCTTCGTGAACGAGGAGCTCGACGAACTGGCCGATGCGCTGGCTGCGGCGGAGCGCATCCTGAGGCCGGGCGGCCGCCTCGTCGTCGTCTCGTTCCATTCGCTGGAGGATCGCATCGTCAAGCGCTTCCTCGCCGATCGCAGCGAGGAGCGGGCAGGGGGCTCGCGCCACCTGCCGGAGCGCAGCGTCGCCGCGCCGACCTTCACGCTTCCGGGCAAGGGGCCGGTCACGGCCGGCGAGGCCGAGATCGGGCGCAACCCGCGGGCGCGCTCGGCCAAGCTGCGCGCCGCCATCCGCACGGCGGCGCCGGCGCGTCCCTTCGACAGAGAGGCGGCGGGCGTGCCGTCGCTGCCACCCCTCACGGCGGAGCGTTCGCAATGA
PROTEIN sequence
Length: 145
RKPTDTIHPATRSFQALRIFVNEELDELADALAAAERILRPGGRLVVVSFHSLEDRIVKRFLADRSEERAGGSRHLPERSVAAPTFTLPGKGPVTAGEAEIGRNPRARSAKLRAAIRTAAPARPFDREAAGVPSLPPLTAERSQ*