ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_500_bf_scaffold_22129_3

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_67_10

partial RP 27 / 55 BSCG 26 / 51 ASCG 3 / 38
Location: comp(1602..3335)

Top 3 Functional Annotations

Value Algorithm Source
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 577.0
  • Bit_score: 444
  • Evalue 6.00e-122
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 577.0
  • Bit_score: 444
  • Evalue 2.70e-121
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A0074 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 577.0
  • Bit_score: 711
  • Evalue 8.40e-202
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1734
GTGGTCGATTTCGACCGCGCCTATCGCCGCGAACTGCAGAATCTCAGCCAGCAGGTCGGGACGCAGATCACTCCCGACCAGGCCAAGGCTTTCGGCCTGCCGAACCGCGTGCTGGCGCGCCTCATCACCGAGGCGGCGCTGGACGACCAAGCCGAGACGCTCGGCCTCGGCGTTTCGCAGGATACGCTCGTCAAGGAAATCGCCGCCGACCCGGCCTTCAAGGGCGCCGCCGGCACCTTCGATCGCGCCTATTTCGTACAGCTGCTGCGCGCCAACGGCCTCAATGAGGACGACTATGTGCTGGAGCGGCGCGCCGTCGAGCGGCGCAAGCAGCTCGCCGACAGCATCTCGGGCGGCGCCACGCTTCCCGTCACGCTCGCCGAGGCGGTCCATATGTACCAGTCCGAGGCGCGCACCATCCGCTACATCGTGATGCCGGCCTCGCTGATCACCGATGTCGGCGAGCCGACGGCGGATCAGCTGACGGCCTATTACAACGACCACAAGGCCGACTGGAAACGTCCGGAACTGCGCGAGATCGCGATCATGACGCTCTCTCCGGACGACGTCGCCCGTCCGTCGGACATCGACGACGCCACCGCGCAGAAGGCCTATGACGCCGACAAGGCGCAGTACACGACGCCCGAGACGCGGCATGTCTACCAGCTGATCTTCTCCGACCAGACGACAGCCGACGAGCAGGCCGCCAAGCTCAAGGGCGGTGCGAGCTTCGAAAGCGTGGTGCAGAGCACGGGCCGCCAGCTCGCCGACACCGATCTCGGCACGGTGACGCGCGACAAGCTGATCGATCCGAAGGTGGCCGAGGCGGCGTTCTCGCTGCCCGCGGGCGGCACCAGCGACGTGATCGTCGGCAGCTTCGGGCCGGTGCTGCTCTGGGTCCCCGAGGTCAATCCGTCGACGGTGAAGCCGTTCGACGAGGTCAAGGCCGACATCAAGTCGAACCTCGCCCTCGAAGCGGCGCGCAAGGACCTCTCCAGCGTCCGCGATTCGATCGAGGATGCCCGGGCCGGCGGCGCCACGCTCCAGGAGATCGCGACCAAGAACAAGCTGACGCTGCGCAGCGTGAATGTCGACGCGACGGGCAATGACGGCGACGGCAAGCCGGTCGCAGACCTCCCTGCCAAGGACCAATTGCTGAAGGCCGCGTTCGAGAGCGATGTCGGCATCGACAACCAGGCGCTCGCCGATGGCGACACGACCGTCTGGTACGCCGTCTCGGCGATCGACCCGGCCGCCGACCGTCCGCTCGACAGCGTCAAGGATCAGGTCGCTGCCGCCTGGAAGAAGGCGACGATCGCGACCAAGCTCGCCGAGAAGGCGAAGGAGACCGCCGCCCGCCTCTCGAAGGGCGAGACCATGGACGCCGTCGCGGCGTCGCTCGGCCTCACCGTCCAGACGGACGAGAATCAGACGCGCGGCAGCAAGCCGCCGGCCGATTTCTCGACCGACGCGCTGAAGGCCGCCTTCGATGGTCCCAAGGGCTATGCCGCCGCCGTCGCCAGCGTCGAGCCCGACCAGCAGATCGTGCTGCAGGTCGAGAGCGTGACCGAGACGCCCTTCGTCAAGGACGACCCCAAGGAAGTGTCCTTGACCCGGCAGCTTGCCGATGCGATGCAGAATGATCTCCTGCAGCAATATATCAGCGAGCTGCAGAACGAGCTCGGCGCCAAGGTCAATCAGCAGGCGCTGCAGCGCGTGATCGGCGCAAGCTGA
PROTEIN sequence
Length: 578
VVDFDRAYRRELQNLSQQVGTQITPDQAKAFGLPNRVLARLITEAALDDQAETLGLGVSQDTLVKEIAADPAFKGAAGTFDRAYFVQLLRANGLNEDDYVLERRAVERRKQLADSISGGATLPVTLAEAVHMYQSEARTIRYIVMPASLITDVGEPTADQLTAYYNDHKADWKRPELREIAIMTLSPDDVARPSDIDDATAQKAYDADKAQYTTPETRHVYQLIFSDQTTADEQAAKLKGGASFESVVQSTGRQLADTDLGTVTRDKLIDPKVAEAAFSLPAGGTSDVIVGSFGPVLLWVPEVNPSTVKPFDEVKADIKSNLALEAARKDLSSVRDSIEDARAGGATLQEIATKNKLTLRSVNVDATGNDGDGKPVADLPAKDQLLKAAFESDVGIDNQALADGDTTVWYAVSAIDPAADRPLDSVKDQVAAAWKKATIATKLAEKAKETAARLSKGETMDAVAASLGLTVQTDENQTRGSKPPADFSTDALKAAFDGPKGYAAAVASVEPDQQIVLQVESVTETPFVKDDPKEVSLTRQLADAMQNDLLQQYISELQNELGAKVNQQALQRVIGAS*