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SCNpilot_expt_500_p_scaffold_1674_21

Organism: SCNPILOT_EXPT_500_P_Flavobacterium_38_9

partial RP 10 / 55 MC: 1 BSCG 10 / 51 ASCG 6 / 38
Location: comp(15063..15308)

Top 3 Functional Annotations

Value Algorithm Source
Putative biopolymer transporter n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GX25_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 79.0
  • Bit_score: 127
  • Evalue 5.60e-27
biopolymer transporter; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 79.0
  • Bit_score: 127
  • Evalue 1.80e-27
Biopolymer transporter ExbD {ECO:0000313|EMBL:AIG33882.1}; TolR protein {ECO:0000313|EMBL:AIJ38290.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 79.0
  • Bit_score: 127
  • Evalue 7.90e-27

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Taxonomy

Flavobacterium psychrophilum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 246
AATGACAAGACGAACAAACAGCACATTACGCTGTCGGTTTCTGAAGAAAAACAATATTATGTCGATAAGCAGAATGTTCCTTTTAATGAATTGGAAGCGGCATTGCTGACAAAAATGGGTGATGCCAGAGACCAAACCGTAATTGTTAGAATTCCTTATAACCTGCAGGTACAGGATTTAGTAGACCTGCTCCAGATTGGTGTCAAAAACAATTTAAAGTTTGTGATTGCCACAGATAAAAAATAA
PROTEIN sequence
Length: 82
NDKTNKQHITLSVSEEKQYYVDKQNVPFNELEAALLTKMGDARDQTVIVRIPYNLQVQDLVDLLQIGVKNNLKFVIATDKK*