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SCNpilot_expt_500_p_scaffold_3697_4

Organism: SCNPILOT_EXPT_500_P_Flavobacterium_38_9

partial RP 10 / 55 MC: 1 BSCG 10 / 51 ASCG 6 / 38
Location: comp(3175..3756)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B325FA similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 193.0
  • Bit_score: 285
  • Evalue 3.80e-74
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGD67226.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 192.0
  • Bit_score: 314
  • Evalue 8.30e-83
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 193.0
  • Bit_score: 267
  • Evalue 4.40e-69

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Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGACAGAAAAGAGTATTCATTCTGACCAATTTTATATTGAAGGATTGCTGCAAAATGATTCGGCAGTTATCAAATCCATTTATAAAAATTTTGTACCTAAAGTCAAAAACTATATCCGTACCAATAGCGGTGATGATGATAATGCGGCCGATGTCGTTCAGGAAGTTCTTGTGACTATTTACCATCAGGCAAAAACAAAAGGATTGCAGCTCACCTGTCCGTTTGAAGCCTATTTTTTTCTGCTCTGCAAAAGGAAATGGCTCAATGAATTAAAAAAACCTTCTAATAAAGGGGTAACAATTAATGACAACATTGTATCTACAGACGAATCAGCCTATGAACTGGTCCTGCAATCAGAATCTTTTGATGAAAGACAATCACTGTTTGATGAAATGTTCCGGAAACTTGGCGAAAAGTGTCAGGAAGTTCTCAAGCTCAGTTTTGTCTTGAAAACGATGGAAGAGGTGGCCCGTCAGCTTAATGTGACATACGGTTATGTGCGAAAGAAGAAATCACTTTGCACAGGGCAGTTAACAGAAATGATTCAGCAGTCGAACCGATATAAATCGTTAAAAAAATAA
PROTEIN sequence
Length: 194
MTEKSIHSDQFYIEGLLQNDSAVIKSIYKNFVPKVKNYIRTNSGDDDNAADVVQEVLVTIYHQAKTKGLQLTCPFEAYFFLLCKRKWLNELKKPSNKGVTINDNIVSTDESAYELVLQSESFDERQSLFDEMFRKLGEKCQEVLKLSFVLKTMEEVARQLNVTYGYVRKKKSLCTGQLTEMIQQSNRYKSLKK*