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SCNpilot_expt_500_p_scaffold_5155_11

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: comp(6971..7675)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 163.0
  • Bit_score: 104
  • Evalue 1.60e-19
Ribonuclease E n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X0M7_PSEDE similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 164.0
  • Bit_score: 101
  • Evalue 9.50e-19
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 165.0
  • Bit_score: 106
  • Evalue 9.30e-21

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACATCTGTTAGTAATCGTTTCTCTTTACTGGTTGTCGATGATGGAAGAAAGAAGAAGGCTCCATCCAAGCCAGCTTCTGCCCCATCCCAACCCGCTGCATCCAATGTAAAGAAACCTGAAGCTAAGCAATCCAATGAGCCAAAACCTCAACAACAACAAAAATCTTCTGTCCCAAAACAAGACACTGGAAAAAAACAACCCCAACAAAAAGATACTGGTGCACCAAAAGGTGATCAACCAAAAGGACCCAGAAGTGACTTACCACCACGCAGAGGTGAACGCCGTGAACATAAAGAAAGTGAACAACCAAGACAACCTCGTCAACCACGCGAACCTCGTGAACCTAGAGAAGGTGAACAACCAAGAGAACCTCGTCAACCTCGTCAACAACGCGAGCCTAGAGATGGTGAACAACCTAGAGAATTCCGCCCTCGTCAACCTCGTGAACCCCGTGAACCTAGAGATGGTGAACAACCAAGAGAAAGAAAACCAAGACCACGTAAGCATTTTATTTTATTTATCGTTTTTTTTAAAATACAGATCTCGCTCTCTTTATTTTTTATTTTTATGAATTATTGTTTTTGTGATTTCAAAAAAAAATTATTATGCGGATTTGACATTCAATATTATTATTTGGAGAGAGATATATATATGAAGAACCTCAAAAACAAATTTTCAAATATTATATTATTTCACAATTGA
PROTEIN sequence
Length: 235
MTSVSNRFSLLVVDDGRKKKAPSKPASAPSQPAASNVKKPEAKQSNEPKPQQQQKSSVPKQDTGKKQPQQKDTGAPKGDQPKGPRSDLPPRRGERREHKESEQPRQPRQPREPREPREGEQPREPRQPRQQREPRDGEQPREFRPRQPREPREPRDGEQPRERKPRPRKHFILFIVFFKIQISLSLFFIFMNYCFCDFKKKLLCGFDIQYYYLERDIYMKNLKNKFSNIILFHN*