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SCNpilot_expt_500_p_scaffold_5201_1

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: 1508..2389

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: endoribonuclease Dicer homolog 1-like n=1 Tax=Fragaria vesca subsp. vesca RepID=UPI0002C34FB0 similarity UNIREF
DB: UNIREF100
  • Identity: 27.8
  • Coverage: 281.0
  • Bit_score: 114
  • Evalue 2.30e-22
endoribonuclease Dicer homolog 1-like similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 281.0
  • Bit_score: 114
  • Evalue 7.30e-23
Putative RNA helicase {ECO:0000313|EMBL:EFA80390.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 256.0
  • Bit_score: 106
  • Evalue 6.80e-20

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Taxonomy

Polysphondylium pallidum → Polysphondylium → Dictyosteliida → Eukaryota

Sequences

DNA sequence
Length: 882
ATGCAAATTACACCTTCAAATTCAACAATGGATCCAAGCTCTTCTCAGAGTGCTCAAAGAGATCAACCCAAAGACTTTGATGACATTAACCTCCAACAGCTCACACATATTCCCCCTCGAGATTATCAAGTAGAGGCCCTATATCACTCGTTGAATGGAAACATTATGGTCTGCTTTCCAACAGGTACAGGAAAAACCCTCGCTTCTTTTATGGCAATGAGAAGAATAGCTAACAAATATCCAAATAAGCTTATCGTATTTTTGGCCCCAAAGATTGTGTTAGTCGACCAACAATGTCGCCAATTTCAAGAATCAAACAACTTCATTAACTACGATAACAAGAGGCCCATTGTTTCGATGAGTTGGAACTCTCAAGTAGACCAATATGAGAAAGAAAAATTTCAAAAAAAATTTTTGGATAAATCGGAGAAGGGTGAGTCCTATGCCCTCTTTGCGACCCCAGACAGCTTCCTTAGTCTATTAAGACGGAAGAACAAGAAACTTTTACTTGAGGATTGCAGCTTGCTTGTTTTTGATGAAGCTCATGGTGCCTCAAAGAAACACCCATATGCCAAAATTATGAAGGAATTCTATGAACCGCTACCGGAAGATAAACGACCAACTGTACTCGCTCTAACAGCTTCACCATCCGGTAGGGAAGATTTGACAGAAACAGAAAATCAGTTAGAAGAGATATGTCGAATTTTCAATTGCACACCATTTATGCCTGAAATATTTCAAGAAGGTCTAGAAACAGCAAAAAATAAGATTGACATCGAACCAATTTATCTTGAGCCTTCTCAACTTGAAATAGAAATTAAAGAAGCAATTAATAATGATTTGGAAGAGATGTTTGATGAACACTTTCCCGACTGGTATTGA
PROTEIN sequence
Length: 294
MQITPSNSTMDPSSSQSAQRDQPKDFDDINLQQLTHIPPRDYQVEALYHSLNGNIMVCFPTGTGKTLASFMAMRRIANKYPNKLIVFLAPKIVLVDQQCRQFQESNNFINYDNKRPIVSMSWNSQVDQYEKEKFQKKFLDKSEKGESYALFATPDSFLSLLRRKNKKLLLEDCSLLVFDEAHGASKKHPYAKIMKEFYEPLPEDKRPTVLALTASPSGREDLTETENQLEEICRIFNCTPFMPEIFQEGLETAKNKIDIEPIYLEPSQLEIEIKEAINNDLEEMFDEHFPDWY*