ggKbase home page

SCNpilot_expt_500_p_scaffold_8321_11

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: 6792..7127

Top 3 Functional Annotations

Value Algorithm Source
Zinc finger domain, LSD1 subclass family protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q22Z15_TETTS similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 75
  • Evalue 4.50e-11
zinc finger domain, LSD1 subclass family protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 75
  • Evalue 1.40e-11
Zinc finger lsd1 subclass family protein {ECO:0000313|EMBL:EAR90506.3}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 75
  • Evalue 6.40e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrahymena thermophila → Tetrahymena → Hymenostomatida → Oligohymenophorea → Eukaryota

Sequences

DNA sequence
Length: 336
GTGAGAAAGTTAAACAACAAATTTGTAATAATTTATTTTAAAAAAAAAAAAAAAAAATGAAAAATAGGATGTGATTCAAGTTGTTTAGAATGTTCAGGAGGAGGAATGAATAATTGCTTGAATTGCAATAACACTTTATACCTTTATTTTGGACAATGTTTAGTTGAATGCCCAACTGGTTATTATCAAGATAATTCATCATTTCAATGTCAAAATTGTCCACAAACTTGTTTATCTTGTTCTTCTGGTAATTTATTTTATAATTTTATTTATTATTTGGTTATTTGGTTTATTATTTTGATTTATTGTAGTAATAAAACAAACGAAATAAAATAA
PROTEIN sequence
Length: 112
VRKLNNKFVIIYFKKKKKK*KIGCDSSCLECSGGGMNNCLNCNNTLYLYFGQCLVECPTGYYQDNSSFQCQNCPQTCLSCSSGNLFYNFIYYLVIWFIILIYCSNKTNEIK*