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SCNpilot_expt_500_p_scaffold_13308_9

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: 7515..7976

Top 3 Functional Annotations

Value Algorithm Source
5'-3' exoribonuclease 1 {ECO:0000256|PIRNR:PIRNR006743}; EC=3.1.13.- {ECO:0000256|PIRNR:PIRNR006743};; TaxID=31234 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis remanei (Caenorhabditis vulgaris).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 133.0
  • Bit_score: 98
  • Evalue 7.40e-18
CRE-XRN-1 protein n=1 Tax=Caenorhabditis remanei RepID=E3MMY7_CAERE similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 133.0
  • Bit_score: 98
  • Evalue 5.30e-18
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 137.0
  • Bit_score: 91
  • Evalue 2.60e-16

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Taxonomy

Caenorhabditis remanei → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 462
TTGGATTTGGAATTTGGAGTTTGTAAAGAACAACTTCCTTTTGAGTATGATTTAGAAAGGATTATAGACGATTTTATTTTTATGGGAATATTAATTGGAAATGATTTTCTTCCCCTCTTACCTGCATTTTATATTCCAAATGGTTTGTTTATAAATTTCTTCAATATGTATAGAATTTTAATTACCTTATCAAAAATAATAGGAGGCTTGACTGTTCTTTATGATTGTTATAAAAAAATATTACCTTCACTTGGTGGATATTTGTTAGATTTTGGAAAAATTAATCTTGAAAGATGTAGCAAATTTTTTTTAGCCTTATGTGAACATGAAAAGAACTTTTTTGAAGGAAAATTGTCAGATACTCGAACACAAAAAAGGAGGGAACAACAAGAATCAATTGAAAGTATCATCTATTTTTTTTTTATTTTTTTTATGGATTGTATAATTTTTACTCTTAATTAG
PROTEIN sequence
Length: 154
LDLEFGVCKEQLPFEYDLERIIDDFIFMGILIGNDFLPLLPAFYIPNGLFINFFNMYRILITLSKIIGGLTVLYDCYKKILPSLGGYLLDFGKINLERCSKFFLALCEHEKNFFEGKLSDTRTQKRREQQESIESIIYFFFIFFMDCIIFTLN*