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SCNpilot_expt_500_p_scaffold_3482_8

Organism: SCNPILOT_EXPT_500_P_Chloroflexi_53_11

partial RP 27 / 55 MC: 3 BSCG 28 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(7205..8125)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4Z5_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 286.0
  • Bit_score: 289
  • Evalue 4.20e-75
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH81575.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 286.0
  • Bit_score: 289
  • Evalue 5.90e-75
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 295.0
  • Bit_score: 269
  • Evalue 1.40e-69

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Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 921
ATGGAGCCAACGGAAGCCGACCGGCTGGAGGCGCAGCGCCCTTATATGTTTGCGATTGCTTACCGGATGCTGGGCAGCGTTACCGAAGCCGAAGATATTGTCCAGGAAGCCTATTTGCGCTACCAGACCAACCCGCCCGACCGGGTAGTGTCACCCAGGTCTTACCTCAGCACTATCGTGACCCGGCTGTGTATCAACTATTTGCAGTCGGCCAGGGCCAGCCGCGAAAGCTATATCGGCCCCTGGCTTCCCGAACCGGCCCTGACTGCGGGGGACGAACGCTTTTCTCCGACCGGTAAAGTCGAACTGCAAGAGTCGCTTTCCCTGGCTTTCATGGTCATCCTGGAGCAACTGACCCCGCTCGAACGAGCGGTCTTTCTGCTGCGTGAGGTCTTTGACTACGATTATGACGAGGTGGCCCAGGTTGTCGGTTCCACCCCGGCGGCCTGCCGCCAGTTGATGAGTCGAGCCCGCAAACACGTGGCCGAAAGGCGGCCTCGCTTCAAGCCGAGCCCCGAAGCCCACCGCCAGATTTTCGATAAGTTTATCGTGGCCGTCACAGAGGGTGACCTGGGCGGGTTACTCCAACTGCTTGACGAGGACGTGGTGTTATGGGCTGATGGCGGCGGCAAAGTCAAAGGGGCGCTCACCAGACCCCTGGAAGGGCCGAAGGCGGTTACAAAATTCCTGGTGGCCTCGCCGCGCCTGTCGGAAGGTCCTTACAGCCACCAACTGGCCGAGGTCAACGGCGAACTGGCCCTGATTCTGAGCGTGCACAACCGGATTGTCATTATTATGACTATCGGGCTCAGTGGCGACAAAATTAACGTCATTCACGTGGTGGGCAATCCCGACAAGTTGCAAAGGATTGCCCGGACCCTCCATCCCGACCCGGGAGATAGTAATCCGGCCAGTGAATAA
PROTEIN sequence
Length: 307
MEPTEADRLEAQRPYMFAIAYRMLGSVTEAEDIVQEAYLRYQTNPPDRVVSPRSYLSTIVTRLCINYLQSARASRESYIGPWLPEPALTAGDERFSPTGKVELQESLSLAFMVILEQLTPLERAVFLLREVFDYDYDEVAQVVGSTPAACRQLMSRARKHVAERRPRFKPSPEAHRQIFDKFIVAVTEGDLGGLLQLLDEDVVLWADGGGKVKGALTRPLEGPKAVTKFLVASPRLSEGPYSHQLAEVNGELALILSVHNRIVIIMTIGLSGDKINVIHVVGNPDKLQRIARTLHPDPGDSNPASE*