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SCNpilot_expt_500_p_scaffold_7029_6

Organism: SCNPILOT_EXPT_500_P_Acidovorax_65_8

partial RP 1 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(4571..5749)

Top 3 Functional Annotations

Value Algorithm Source
YD repeat protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TV35_ACIAC similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 392.0
  • Bit_score: 135
  • Evalue 9.90e-29
RHS repeat-associated core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 379.0
  • Bit_score: 182
  • Evalue 2.20e-43
YD repeat protein {ECO:0000313|EMBL:ABM34823.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.2
  • Coverage: 392.0
  • Bit_score: 135
  • Evalue 1.40e-28

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
GAGTACGACCTCTGGGGCCGCATCATCGCCCAGACCCAGGCTGGCGCCAGCCTGCAACTGCGCTACGACAGCGCAGGCCGCGTCACGGAACTCCTCAACGAGAACCACGCCACTACCCGCTTCACCTACGACAGCCAGGACCGCCTGATCCAGGAAGTGGGCTTCGATGGCCGTAGCCAGGCCTACCGCTACGACGCTGCAGGCCAACTGATCGAAAAGACCGACAGCCAAGACAGCAGCTTGGCCGCTGCGACCGAAGGCATGGGTACCGTGCGCAGCCGCTTCCACTACGACAACGCCGGGCGGCTGACCTACCGCATCACCGCCAAAGCAGGTGCGGCCTGCGAGGTGGACATCTCCCCTGTCAAAGCCGAGGCCCCAGACAACGACCTTCAAATCCACCAGTTCAGCTACAGCGACAGTGGCGAACTCCTGAGCACCGAGGGCCGGAAACTGGGCACAGAGGCGACCACCGCGCTGGTCAACGACTGGTTGCAACTGAGTACTGAACAACTGCGTACCGTGCTCAACCAGCAGCACGACACGCAAGCCCTTGCCAATAGCCCCTGGCTGCAAAGCCTGCAAGTCCGATACCTGCAGCCCAGAACCCGCGTAGATCTGCAACGTGACGCTCTGGGCCGCACCACCGGCGAAGTGCAAACGCTCTACTGCGTACCCGAGGCGGACACCAACCGCACGCAGGCCCTGCACATCGACGGCAGCATTACCCACCTGCATTACGACAGCCTGCACCAGTTGCGGCAAGCCGTGCAACGCAACCCCCAAGGGCAAGAACTAAGCCGCACCACTTACCGCTACGACGCATTCGGGCGGCGGGTGAGCAAGACACACCGAAAAACACGCGAGCAAGGCCAGATCACCCACTTCGGCTGGGACGGGGACCGGCTCGTTCATACGGAGACCGCATATCAGATTCATCACACGGTGTACGAGCCTGGCAGCTTTGTGCCGCTGCTGCAGGTGCAGAGAAGCAAAGAGAACGCGGGGCAGACCGACCCCGTCAAGACATTGCTGGGGCTGGGAAGTAATGACGCCAGCAACGCCCTGGAGCGAGAACTCCCCCGCGAGGAACGAGAACTCCTTCACCAGGCCTTGAAGGAGGCCCTGCAGCCTGGCTACCAACTCTCAGGGCTATTGCCGCAGGAATTGCAGGCGTAG
PROTEIN sequence
Length: 393
EYDLWGRIIAQTQAGASLQLRYDSAGRVTELLNENHATTRFTYDSQDRLIQEVGFDGRSQAYRYDAAGQLIEKTDSQDSSLAAATEGMGTVRSRFHYDNAGRLTYRITAKAGAACEVDISPVKAEAPDNDLQIHQFSYSDSGELLSTEGRKLGTEATTALVNDWLQLSTEQLRTVLNQQHDTQALANSPWLQSLQVRYLQPRTRVDLQRDALGRTTGEVQTLYCVPEADTNRTQALHIDGSITHLHYDSLHQLRQAVQRNPQGQELSRTTYRYDAFGRRVSKTHRKTREQGQITHFGWDGDRLVHTETAYQIHHTVYEPGSFVPLLQVQRSKENAGQTDPVKTLLGLGSNDASNALERELPREERELLHQALKEALQPGYQLSGLLPQELQA*