ggKbase home page

gwa1_scaffold_93_50

Organism: GWA1_OD1_56_13

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(43237..45015)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E {ECO:0000313|EMBL:KKW46968.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 592.0
  • Bit_score: 1137
  • Evalue 0.0
secretion system protein E KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 599.0
  • Bit_score: 460
  • Evalue 5.70e-127
Type II secretion system protein E similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 459
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_OD1_57_6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1779
ATGGGCAGGAGGCGCTATACTTCTTCATATATGCACGTTTCAGAGGGAGAGCTCAAGGAGTTCATCACCGATTCTGGCCTTATCGCCAAAAAAGATATCGAGGCTGCGGCGGCGGAGGCGAAAGAACGCGGTCAGTCGCTGGGCGACATTCTCGTATCGCGTGGCTCCTTGACCAGCGACGCCCTTCGGCGCATTCAGGCATACGTCCTCGGCATTCCGTTCGTGAACTTGAAAGAGCATCGTATCCCGGCCGACGTTCTCGCGCTCATTCCAGAACCCATCGCACGCACGCACAATATCATCGCCTACAGAAAAGAAGGGGACGCTCTCGAAGTCGTGATGCTCGACGTTGGAGACCTTGTATCCATCGACTCGGTCCGGAAAAAAACGGGACTGAAGATACTGCCGCGGCTCACTGACGCCGACAGCATCAAACACGCGCTCCTGCAATACCAAAAATCGCTGAAGGACGAATTCGGCGACATCATTTCGACCGAAGCGGAGAAAATACGCGTCGTCGCGGAGGGAGGAAAGGACCTCTCGGGCGACGAACTGAAGAAGATGGCCGAGGACCTGCCGATCGTGCGCATCGTCGACACTCTTTTGCGGCATGCGATCGTGCAGGGGGCTTCGGACATCCACATCGAACCGATGGAAAAGGAGGTGCTGGTGCGTTACCGCATCGACGGCATACTCCACGACGCAATGACCTTGCCGAAGAACGCGGCGGCGGGCATCGTCGCGCGCATCAAAGTGCTCTCCAACCTGAAACTCGACGAAAAGCGCCTCCCGCAGGACGGCCGGTTCAAGATGGAGACCGAAGCCGACAAGGTCTCCTTCCGCGTCTCGATCCTGCCGACGTTCTTCGGCGAGAAAACGGTTATGCGCCTTTTGCGGGAAACCGGCGAGGGATTCACTCTCGAGGTTCTCGGCCTGCATGGCGAGAATATGGAGCGTATCCACCGCGCACTCAAGCAGACCACCGGCATCATCCTCATTTCGGGCCCGACCGGCAGCGGCAAGACGACGACGTTGTACACCATGCTCGACATCCTCAACCAGCCGGACGTGAACATCTCGACCGTCGAAGACCCGATCGAATACCAGATGAAGCGCGTAAATCAGACCCAGGTGAATCCCCAGATAGGATTCACCTTCGCCAACGGGCTCCGTTCGCTTGTGCGCCAGGACCCGGACATCATCATGGTCGGCGAGATACGCGACGGCGAAACGGCATCATTGGCGATCAACGCCGCGCTGACCGGCCATCTCGTACTCTCGACTATCCATACCAATAGCGCCGCAGGCGCCATTCCGCGTCTCATTGACATGGGCGTTGAGCCTTTCCTGCTCGTCTCTACCGTCCGCGTCATCATCGGGCAACGGCTTGTGCGTAAGCTCTGCGATACGAAGGAGCAGTACGCGATGGACAAAACGACACGCGCGAAGATCGCGAGCGACGCGGAATTCGCCGCCGCGTTCAAGGCGCTCCAGGACGAAAAACTTCTTAAGGCGGGAACGACGCTCGACGAGCTCCCATTTTATCGGCCGATGCCCTCGCCTGAATGCGCCGACGGCTACAAAAGCCGCATCGGCATTCACGAAGTGCTCGATGTTTCGCCCGCCATCAGGGAAATCATCCTCCGTTCGGGGACCAGTGACGCGCTGGAAGCACAGGCGAAGAAGGAAGGCATGCTCACGATGCTCGAGGACGGTCTCTACAAAGCGGCGCGCGGCATCACGAGCATCGAGGAGGTACTCCGTACTATAACCGAATAA
PROTEIN sequence
Length: 593
MGRRRYTSSYMHVSEGELKEFITDSGLIAKKDIEAAAAEAKERGQSLGDILVSRGSLTSDALRRIQAYVLGIPFVNLKEHRIPADVLALIPEPIARTHNIIAYRKEGDALEVVMLDVGDLVSIDSVRKKTGLKILPRLTDADSIKHALLQYQKSLKDEFGDIISTEAEKIRVVAEGGKDLSGDELKKMAEDLPIVRIVDTLLRHAIVQGASDIHIEPMEKEVLVRYRIDGILHDAMTLPKNAAAGIVARIKVLSNLKLDEKRLPQDGRFKMETEADKVSFRVSILPTFFGEKTVMRLLRETGEGFTLEVLGLHGENMERIHRALKQTTGIILISGPTGSGKTTTLYTMLDILNQPDVNISTVEDPIEYQMKRVNQTQVNPQIGFTFANGLRSLVRQDPDIIMVGEIRDGETASLAINAALTGHLVLSTIHTNSAAGAIPRLIDMGVEPFLLVSTVRVIIGQRLVRKLCDTKEQYAMDKTTRAKIASDAEFAAAFKALQDEKLLKAGTTLDELPFYRPMPSPECADGYKSRIGIHEVLDVSPAIREIILRSGTSDALEAQAKKEGMLTMLEDGLYKAARGITSIEEVLRTITE*